RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C4orf32Q8N8J7 132 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 NXPE3Q969Y0 559 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 IFT74Q96LB3 600 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 CCDC113Q9H0I3 377 aa20.83■□□□□ 0.93
CCDC43-205ENST00000592333 SF3B1O75533 1304 aaKnown RBP eCLIP20.82■□□□□ 0.92
CCDC43-205ENST00000592333 A0A087WWV3 80 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 CCDC195A0A1B0GUA6 201 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 TADA2AO75478 443 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 THP07101 528 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 CLCN5P51795 746 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 TDGQ13569 410 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 HSP90AA2PQ14568 343 aaPredicted RBP20.82■□□□□ 0.92
CCDC43-205ENST00000592333 DCAF4L1Q3SXM0 396 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 LILRA6Q6PI73 481 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 MAEAQ7L5Y9 396 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 KCTD17Q8N5Z5 321 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 DEPTORQ8TB45 409 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 GPR62Q9BZJ7 368 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 PDZD7Q9H5P4 517 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 LRWD1Q9UFC0 647 aa20.82■□□□□ 0.92
CCDC43-205ENST00000592333 PRKCBP05771 671 aa20.81■□□□□ 0.92
CCDC43-205ENST00000592333 VCPP55072 806 aaKnown RBP20.81■□□□□ 0.92
CCDC43-205ENST00000592333 CDR2LQ86X02 465 aaPredicted RBP20.81■□□□□ 0.92
CCDC43-205ENST00000592333 IGSF22Q8N9C0 903 aa20.81■□□□□ 0.92
CCDC43-205ENST00000592333 EPS15L1Q9UBC2 864 aa20.81■□□□□ 0.92
CCDC43-205ENST00000592333 KIF3AQ9Y496 699 aa20.81■□□□□ 0.92
CCDC43-205ENST00000592333 TGM5O43548 720 aa20.8■□□□□ 0.92
CCDC43-205ENST00000592333 GALR2O43603 387 aaPredicted RBP20.8■□□□□ 0.92
CCDC43-205ENST00000592333 ASGR2P07307 311 aa20.8■□□□□ 0.92
CCDC43-205ENST00000592333 CCT6AP40227 531 aaKnown RBP20.8■□□□□ 0.92
CCDC43-205ENST00000592333 PRPHP41219 470 aa20.8■□□□□ 0.92
CCDC43-205ENST00000592333 BSNDQ8WZ55 320 aa20.8■□□□□ 0.92
CCDC43-205ENST00000592333 KCNK12Q9HB15 430 aa20.8■□□□□ 0.92
CCDC43-205ENST00000592333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.8■□□□□ 0.92
CCDC43-205ENST00000592333 KLK14Q9P0G3 267 aa20.8■□□□□ 0.92
CCDC43-205ENST00000592333 KCNG1Q9UIX4 513 aa20.8■□□□□ 0.92
CCDC43-205ENST00000592333 DUSP12Q9UNI6 340 aa20.8■□□□□ 0.92
CCDC43-205ENST00000592333 TMEM132AQ24JP5 1023 aa20.79■□□□□ 0.92
CCDC43-205ENST00000592333 ASTLQ6HA08 431 aaPredicted RBP20.79■□□□□ 0.92
CCDC43-205ENST00000592333 RTL10Q7L3V2 364 aa20.79■□□□□ 0.92
CCDC43-205ENST00000592333 RIN2Q8WYP3 895 aaPredicted RBP20.79■□□□□ 0.92
CCDC43-205ENST00000592333 PIK3R5Q8WYR1 880 aa20.79■□□□□ 0.92
CCDC43-205ENST00000592333 KIF2CQ99661 725 aa20.79■□□□□ 0.92
CCDC43-205ENST00000592333 TTPALQ9BTX7 342 aa20.79■□□□□ 0.92
CCDC43-205ENST00000592333 NT5C3AQ9H0P0 336 aa20.79■□□□□ 0.92
CCDC43-205ENST00000592333 BHMT2Q9H2M3 363 aa20.79■□□□□ 0.92
CCDC43-205ENST00000592333 C17orf75Q9HAS0 396 aa20.79■□□□□ 0.92
CCDC43-205ENST00000592333 ZFP37Q9Y6Q3 630 aaPredicted RBP20.79■□□□□ 0.92
CCDC43-205ENST00000592333 CLUHO75153 1309 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 MTCL1Q9Y4B5 1905 aaKnown RBP20.78■□□□□ 0.92
CCDC43-205ENST00000592333 F8W810 466 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 TMEM189-UBE2V1I3L0A0 370 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 PTGESO14684 152 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 RECQL4O94761 1208 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 PDGFBP01127 241 aaPredicted RBP20.78■□□□□ 0.92
CCDC43-205ENST00000592333 NAB2Q15742 525 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 SMG7Q92540 1137 aaKnown RBP20.78■□□□□ 0.92
CCDC43-205ENST00000592333 ZNF707Q96C28 371 aaPredicted RBP20.78■□□□□ 0.92
CCDC43-205ENST00000592333 UROC1Q96N76 676 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 PRKD2Q9BZL6 878 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 SNTG2Q9NY99 539 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 KIAA1024Q9UPX6 916 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 DNM3Q9UQ16 869 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 CACNA1HO95180 2353 aa20.78■□□□□ 0.92
CCDC43-205ENST00000592333 C2orf16Q68DN1 1984 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 K7ERI5 159 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 ZMYND10O75800 440 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 HNRNPA1P09651 372 aaKnown RBP eCLIP20.77■□□□□ 0.92
CCDC43-205ENST00000592333 HOXA9P31269 272 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 PTGDRQ13258 359 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 KRT79Q5XKE5 535 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 PALB2Q86YC2 1186 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 TIPINQ9BVW5 301 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 MFSD1Q9H3U5 465 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 TMEM134Q9H6X4 195 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 WNT16Q9UBV4 365 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 TNFSF13BQ9Y275 285 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
CCDC43-205ENST00000592333 PLXNA3P51805 1871 aa20.77■□□□□ 0.92
CCDC43-205ENST00000592333 TTLL13PA6NNM8 815 aa20.76■□□□□ 0.91
CCDC43-205ENST00000592333 POU2F2P09086 479 aa20.76■□□□□ 0.91
CCDC43-205ENST00000592333 ECM1Q16610 540 aa20.76■□□□□ 0.91
CCDC43-205ENST00000592333 RTP2Q5QGT7 225 aa20.76■□□□□ 0.91
CCDC43-205ENST00000592333 ATF7IP2Q5U623 682 aa20.76■□□□□ 0.91
CCDC43-205ENST00000592333 DRC1Q96MC2 740 aa20.76■□□□□ 0.91
CCDC43-205ENST00000592333 PIDD1Q9HB75 910 aa20.76■□□□□ 0.91
CCDC43-205ENST00000592333 DDX19AQ9NUU7 478 aaKnown RBP20.76■□□□□ 0.91
CCDC43-205ENST00000592333 FBXW11Q9UKB1 542 aa20.76■□□□□ 0.91
CCDC43-205ENST00000592333 PROB1E7EW31 1015 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 RFPL2O75678 378 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 KIF4AO95239 1232 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 GBP2P32456 591 aaPredicted RBP20.75■□□□□ 0.91
CCDC43-205ENST00000592333 TOB1P50616 345 aaPredicted RBP20.75■□□□□ 0.91
CCDC43-205ENST00000592333 UVSSAQ2YD98 709 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 RILPL1Q5EBL4 403 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 FAM171A1Q5VUB5 890 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 DCLRE1AQ6PJP8 1040 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.75■□□□□ 0.91
CCDC43-205ENST00000592333 TMEM105Q8N8V8 129 aa20.75■□□□□ 0.91
CCDC43-205ENST00000592333 LNX1Q8TBB1 728 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms