RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CDSNQ15517 529 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 SPATS1Q496A3 300 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 ANKS6Q68DC2 871 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 ZNF572Q7Z3I7 529 aaPredicted RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 PRRT2Q7Z6L0 340 aaPredicted RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 ANKRD35Q8N283 1001 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 ZGPATQ8N5A5 531 aaKnown RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 MDGA1Q8NFP4 955 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 JDP2Q8WYK2 163 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 DVL3Q92997 716 aaPredicted RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 RAB24Q969Q5 203 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 HDAC10Q969S8 669 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 MIEF2Q96C03 454 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 HSPBAP1Q96EW2 488 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 PUS7Q96PZ0 661 aaKnown RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 CPPED1Q9BRF8 314 aaPredicted RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 RHOBTB2Q9BYZ6 727 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 CSRNP2Q9H175 543 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 KCNH6Q9H252 994 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 ZIM2Q9NZV7 527 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 BCCIPQ9P287 314 aaKnown RBP eCLIP4.53□□□□□ -1.68
VMP1-212ENST00000591782 ZNF180Q9UJW8 692 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 AJAP1Q9UKB5 411 aaPredicted RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 G3BP2Q9UN86 482 aaKnown RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 GIT1Q9Y2X7 761 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 PCDHA13Q9Y5I0 950 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 ATRNL1Q5VV63 1379 aa4.53□□□□□ -1.69
VMP1-212ENST00000591782 E2F8A0AVK6 867 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 IPO13O94829 963 aaKnown RBP4.52□□□□□ -1.69
VMP1-212ENST00000591782 AMY1AP04745 511 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 CT47B1P0C2W7 299 aaPredicted RBP4.52□□□□□ -1.69
VMP1-212ENST00000591782 IL2RBP14784 551 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 ALOX15P16050 662 aaPredicted RBP4.52□□□□□ -1.69
VMP1-212ENST00000591782 RABGGTBP53611 331 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 SP140Q13342 867 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 PRKD1Q15139 912 aaPredicted RBP4.52□□□□□ -1.69
VMP1-212ENST00000591782 FAM47AQ5JRC9 791 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 C1QL3Q5VWW1 255 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 AFMIDQ63HM1 303 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 Q6ZRM9 215 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 DOK3Q7L591 496 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 FAM83AQ86UY5 434 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 SLC35B2Q8TB61 432 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 ATXN2LQ8WWM7 1075 aaKnown RBP4.52□□□□□ -1.69
VMP1-212ENST00000591782 KAT5Q92993 513 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 PGBD4Q96DM1 585 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 C1QTNF3Q9BXJ4 246 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 CHMP4AQ9BY43 222 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 CPEB1Q9BZB8 566 aaKnown RBP4.52□□□□□ -1.69
VMP1-212ENST00000591782 CDH19Q9H159 772 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 MANSC1Q9H8J5 431 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 TMEM140Q9NV12 185 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 KLHL42Q9P2K6 505 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 HDAC5Q9UQL6 1122 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 ANKRD6Q9Y2G4 727 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 ACTL7AQ9Y615 435 aa4.52□□□□□ -1.69
VMP1-212ENST00000591782 NCANO14594 1321 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 MYBBP1AQ9BQG0 1328 aaKnown RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 CXorf49A8MYA2 514 aaPredicted RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 B5MCH6 92 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 PRRG2O14669 202 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 CYP27B1O15528 508 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 GPR32O75388 356 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 RAP2AP10114 183 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 ZEB1P37275 1124 aaPredicted RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 ALDH1A3P47895 512 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 FXR1P51114 621 aaKnown RBP eCLIP4.51□□□□□ -1.69
VMP1-212ENST00000591782 SCNN1GP51170 649 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 TARDBPQ13148 414 aaKnown RBP eCLIP4.51□□□□□ -1.69
VMP1-212ENST00000591782 LRRC41Q15345 812 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 CSRP2Q16527 193 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 NFE2Q16621 373 aaPredicted RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 RRP12Q5JTH9 1297 aaKnown RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 CATIPQ7Z7H3 387 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 GSPT2Q8IYD1 628 aaKnown RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 OR52N2Q8NGI0 321 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 JPH3Q8WXH2 748 aaPredicted RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 CYFIP2Q96F07 1278 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 CDK5RAP1Q96SZ6 601 aaKnown RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 GPR87Q9BY21 358 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 TDP1Q9NUW8 608 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 RUVBL1Q9Y265 456 aaKnown RBP4.51□□□□□ -1.69
VMP1-212ENST00000591782 EID1Q9Y6B2 187 aa4.51□□□□□ -1.69
VMP1-212ENST00000591782 KLRG2A4D1S0 409 aaPredicted RBP4.5□□□□□ -1.69
VMP1-212ENST00000591782 TBKBP1A7MCY6 615 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 PRR5-ARHGAP8B1AHC4 643 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 POU2F2P09086 479 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 DDCP20711 480 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 PDCP20941 246 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 ACRV1P26436 265 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 BUD31P41223 144 aaPredicted RBP4.5□□□□□ -1.69
VMP1-212ENST00000591782 ATP8B2P98198 1209 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 CDC42EP1Q00587 391 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 CRHR2Q13324 411 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 MTM1Q13496 603 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 BMT2Q1RMZ1 405 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 SPDYAQ5MJ70 313 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 GPRIN1Q7Z2K8 1008 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 TPH2Q8IWU9 490 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 RNF169Q8NCN4 708 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms