RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 CPB2Q96IY4 423 aa12.36□□□□□ -0.43
TUBD1-211ENST00000591548 CDT1Q9H211 546 aa12.36□□□□□ -0.43
TUBD1-211ENST00000591548 PDZD7Q9H5P4 517 aa12.36□□□□□ -0.43
TUBD1-211ENST00000591548 PDE11AQ9HCR9 933 aa12.36□□□□□ -0.43
TUBD1-211ENST00000591548 NLRC4Q9NPP4 1024 aa12.36□□□□□ -0.43
TUBD1-211ENST00000591548 RBAKQ9NYW8 714 aaPredicted RBP12.36□□□□□ -0.43
TUBD1-211ENST00000591548 CEP72Q9P209 647 aa12.36□□□□□ -0.43
TUBD1-211ENST00000591548 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
TUBD1-211ENST00000591548 PTPRJQ12913 1337 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 A0A1B0GUA9 196 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 TULP1O00294 542 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 P4HA2O15460 535 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 N4BP1O75113 896 aaKnown RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 LRRN2O75325 713 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 CABYRO75952 493 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 ERLIN2O94905 339 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 UCHL3P15374 230 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 EIF4BP23588 611 aaKnown RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 HOXA11P31270 313 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 MXI1P50539 228 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 SNX17Q15036 470 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 TMEM132AQ24JP5 1023 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 EPC2Q52LR7 807 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 E4F1Q66K89 784 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 RRAGAQ7L523 313 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 USP37Q86T82 979 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 SERINC5Q86VE9 423 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 CEP120Q8N960 986 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 EHBP1Q8NDI1 1231 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 ZNF397Q8NF99 534 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 FAM84AQ96KN4 292 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 TSEN34Q9BSV6 310 aaKnown RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 INTS2Q9H0H0 1204 aaKnown RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 UNC93B1Q9H1C4 597 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 MOXD2PA6NHM9 499 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 SOWAHDA6NJG2 315 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 LRRC53A6NM62 1247 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 ARHGAP6O43182 974 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 NRDCO43847 1150 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 ZNF500O60304 480 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 MCF2P10911 925 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 HNRNPH3P31942 346 aaKnown RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 GTF2H1P32780 548 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 CRYBB1P53674 252 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 ITGA7Q13683 1181 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 MTF1Q14872 753 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 MEA1Q16626 185 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 KRT39Q6A163 491 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 PDXDC1Q6P996 788 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 GJB7Q6PEY0 223 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 RAD9BQ6WBX8 426 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 CACNA2D4Q7Z3S7 1137 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 BRSK2Q8IWQ3 736 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 TMEM192Q8IY95 271 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 THNSL1Q8IYQ7 743 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 CHP1Q99653 195 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 NAA15Q9BXJ9 866 aaKnown RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 FBXL5Q9UKA1 691 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 AJAP1Q9UKB5 411 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-211ENST00000591548 PLAGL2Q9UPG8 496 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 COQ4Q9Y3A0 265 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 FHOD1Q9Y613 1164 aa12.35□□□□□ -0.43
TUBD1-211ENST00000591548 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 TNNI1P19237 187 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 KCNJ6P48051 423 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 OSTNP61366 133 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 PCBP1Q15365 356 aaKnown RBP eCLIP12.34□□□□□ -0.43
TUBD1-211ENST00000591548 MTFR1Q15390 333 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 ENOX2Q16206 610 aaKnown RBP12.34□□□□□ -0.43
TUBD1-211ENST00000591548 PTGISQ16647 500 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 LMBRD2Q68DH5 695 aaPredicted RBP12.34□□□□□ -0.43
TUBD1-211ENST00000591548 PHLDB3Q6NSJ2 640 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 CATSPER4Q7RTX7 472 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 TAS1R2Q8TE23 839 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 SEMA4DQ92854 862 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 FNBP1Q96RU3 617 aa12.34□□□□□ -0.43
TUBD1-211ENST00000591548 CELF4Q9BZC1 486 aaKnown RBP12.34□□□□□ -0.43
TUBD1-211ENST00000591548 RRAGDQ9NQL2 400 aaPredicted RBP12.34□□□□□ -0.43
TUBD1-211ENST00000591548 PAK6Q9NQU5 681 aaPredicted RBP12.34□□□□□ -0.43
TUBD1-211ENST00000591548 A0A1W2PQ45 241 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-211ENST00000591548 A0A1W2PQY0 241 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 MEFVO15553 781 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-211ENST00000591548 MYCP01106 439 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-211ENST00000591548 C4BPAP04003 597 aaKnown RBP12.33□□□□□ -0.44
TUBD1-211ENST00000591548 MRPS6P82932 125 aaKnown RBP12.33□□□□□ -0.44
TUBD1-211ENST00000591548 CETN1Q12798 172 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
TUBD1-211ENST00000591548 IQCEQ6IPM2 695 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 CYP26C1Q6V0L0 522 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 TOGARAM2Q6ZUX3 1019 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 RPAINQ86UA6 219 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 ARRDC4Q8NCT1 418 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms