RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CMASQ8NFW8 434 aaPredicted RBP11.55□□□□□ -0.56
VPS4B-207ENST00000591519 ASAP3Q8TDY4 903 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 RPS6KC1Q96S38 1066 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 GAD1Q99259 594 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 PRKD2Q9BZL6 878 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 IRF2BPLQ9H1B7 796 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 SFXN1Q9H9B4 322 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
VPS4B-207ENST00000591519 RXFP1Q9HBX9 757 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 NPDC1Q9NQX5 325 aaPredicted RBP11.55□□□□□ -0.56
VPS4B-207ENST00000591519 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 CHST7Q9NS84 486 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 MARCH5Q9NX47 278 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
VPS4B-207ENST00000591519 JAK2O60674 1132 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 BRD1O95696 1058 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 SP100P23497 879 aaPredicted RBP11.54□□□□□ -0.56
VPS4B-207ENST00000591519 VCPP55072 806 aaKnown RBP11.54□□□□□ -0.56
VPS4B-207ENST00000591519 TRIM29Q14134 588 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 SWT1Q5T5J6 900 aaKnown RBP11.54□□□□□ -0.56
VPS4B-207ENST00000591519 TMC5Q6UXY8 1006 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 TAS1R1Q7RTX1 841 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 ZBTB33Q86T24 672 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 CATSPER3Q86XQ3 398 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 CPB2Q96IY4 423 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 HERC2P3Q9BVR0 1158 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 TMEM60Q9H2L4 133 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 FZD8Q9H461 694 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 TUFT1Q9NNX1 390 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 LIMD1Q9UGP4 676 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 DPP7Q9UHL4 492 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 DBR1Q9UK59 544 aaKnown RBP11.54□□□□□ -0.56
VPS4B-207ENST00000591519 HES2Q9Y543 173 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 KMT2EQ8IZD2 1858 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 ZMYM2Q9UBW7 1377 aa11.54□□□□□ -0.56
VPS4B-207ENST00000591519 NR1I2O75469 434 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 MLH1P40692 756 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 OR1G1P47890 313 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 DSG1Q02413 1049 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 ST3GAL1Q11201 340 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 ORC2Q13416 577 aaPredicted RBP11.53□□□□□ -0.56
VPS4B-207ENST00000591519 FAM187BQ17R55 369 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 SLC27A1Q6PCB7 646 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 OTOP3Q7RTS5 596 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 HACE1Q8IYU2 909 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 TDRD5Q8NAT2 981 aaKnown RBP11.53□□□□□ -0.56
VPS4B-207ENST00000591519 MCPH1Q8NEM0 835 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 FEZF2Q8TBJ5 459 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 PIGOQ8TEQ8 1089 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 HDAC7Q8WUI4 952 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 ACSF2Q96CM8 615 aaPredicted RBP11.53□□□□□ -0.56
VPS4B-207ENST00000591519 PRIMPOLQ96LW4 560 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 ZFP42Q96MM3 310 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 NACC1Q96RE7 527 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 KIF2CQ99661 725 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 POLR3CQ9BUI4 534 aaPredicted RBP11.53□□□□□ -0.56
VPS4B-207ENST00000591519 COLEC11Q9BWP8 271 aa11.53□□□□□ -0.56
VPS4B-207ENST00000591519 A0A087WWV3 80 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 TEX28O15482 410 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 B4GALT5O43286 388 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 GFRA3O60609 400 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 PDGFBP01127 241 aaPredicted RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 SSBP05455 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 URODP06132 367 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 ADH1AP07327 375 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 MUTP22033 750 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 RPA1P27694 616 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 GLUD2P49448 558 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 SCNN1GP51170 649 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 COPS2P61201 443 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 CDCA2Q69YH5 1023 aaPredicted RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 LLPHQ9BRT6 129 aaKnown RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 TRIM6Q9C030 488 aaPredicted RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 FOXP1Q9H334 677 aaPredicted RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 NXF3Q9H4D5 531 aaKnown RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 PRMT7Q9NVM4 692 aaPredicted RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 FNIP2Q9P278 1114 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 LIMCH1Q9UPQ0 1083 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 PRG3Q9Y2Y8 225 aaPredicted RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 TDRD15B5MCY1 1934 aaKnown RBP11.52□□□□□ -0.57
VPS4B-207ENST00000591519 CACNA1HO95180 2353 aa11.52□□□□□ -0.57
VPS4B-207ENST00000591519 DENND4AQ7Z401 1863 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 CCDC195A0A1B0GUA6 201 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 LCE2BO14633 110 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 MED24O75448 989 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 ASGR2P07307 311 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 CYP11B2P19099 503 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 AKAP5P24588 427 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 MCM7P33993 719 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 RBM25P49756 843 aaKnown RBP11.51□□□□□ -0.57
VPS4B-207ENST00000591519 CLCN5P51795 746 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 GRIK3Q13003 919 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 TDGQ13569 410 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 SAFBQ15424 915 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS4B-207ENST00000591519 LILRA6Q6PI73 481 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 CCDC149Q6ZUS6 474 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 CCDC83Q8IWF9 413 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms