RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 P2RX5Q93086 422 aa18.16■□□□□ 0.5
GCDH-213ENST00000590627 TRPV2Q9Y5S1 764 aa18.16■□□□□ 0.5
GCDH-213ENST00000590627 PDXKO00764 312 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 DGKIO75912 1065 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 PIGRP01833 764 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 EIF4BP23588 611 aaKnown RBP18.15■□□□□ 0.5
GCDH-213ENST00000590627 SSTR3P32745 418 aaPredicted RBP18.15■□□□□ 0.5
GCDH-213ENST00000590627 ZNF165P49910 485 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 TMEM62Q0P6H9 643 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 STRN3Q13033 797 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 BTG3Q14201 252 aaPredicted RBP18.15■□□□□ 0.5
GCDH-213ENST00000590627 KLHL10Q6JEL2 608 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 FAM43BQ6ZT52 329 aaPredicted RBP18.15■□□□□ 0.5
GCDH-213ENST00000590627 NELFCDQ8IXH7 590 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 ENOX1Q8TC92 643 aaKnown RBP18.15■□□□□ 0.5
GCDH-213ENST00000590627 TMEM174Q8WUU8 243 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 PRIMPOLQ96LW4 560 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 SCLT1Q96NL6 688 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 MED15Q96RN5 788 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 INO80BQ9C086 356 aaPredicted RBP18.15■□□□□ 0.5
GCDH-213ENST00000590627 MINDY3Q9H8M7 445 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 AGO3Q9H9G7 860 aaKnown RBP18.15■□□□□ 0.5
GCDH-213ENST00000590627 CDHR5Q9HBB8 845 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 CGNQ9P2M7 1197 aaKnown RBP18.15■□□□□ 0.5
GCDH-213ENST00000590627 PRKAG3Q9UGI9 489 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 TRAF3IP3Q9Y228 551 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 ATG2AQ2TAZ0 1938 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 ZMYM2Q9UBW7 1377 aa18.15■□□□□ 0.5
GCDH-213ENST00000590627 BICDL2A1A5D9 508 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 ACKR2O00590 384 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 TGFB1I1O43294 461 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 PRKCBP05771 671 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 ALADP13716 330 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 LRRC63Q05C16 580 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 NFIL3Q16649 462 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 CTC1Q2NKJ3 1217 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 TTI2Q6NXR4 508 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 ZPBP2Q6X784 338 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 GOLGA5Q8TBA6 731 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 FAM200AQ8TCP9 573 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 ZNF668Q96K58 619 aaPredicted RBP18.14■□□□□ 0.49
GCDH-213ENST00000590627 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 OSMRQ99650 979 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 GBP3Q9H0R5 595 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 TYW1Q9NV66 732 aaKnown RBP18.14■□□□□ 0.49
GCDH-213ENST00000590627 PRMT7Q9NVM4 692 aaPredicted RBP18.14■□□□□ 0.49
GCDH-213ENST00000590627 CLDND1Q9NY35 253 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 CTNND2Q9UQB3 1225 aa18.14■□□□□ 0.49
GCDH-213ENST00000590627 PRR33A8MZF0 331 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 INO80B-WBP1J3KQ70 363 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 IKBKBO14920 756 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 GRM6O15303 877 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 CD52P31358 61 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 PMS1P54277 932 aaKnown RBP18.13■□□□□ 0.49
GCDH-213ENST00000590627 IQCB1Q15051 598 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 AMHR2Q16671 573 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 EDRF1Q3B7T1 1238 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 ANKRD40Q6AI12 368 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 EP400NLQ6ZTU2 488 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 GAS2L3Q86XJ1 694 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 NPAS4Q8IUM7 802 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 CMTR2Q8IYT2 770 aaKnown RBP18.13■□□□□ 0.49
GCDH-213ENST00000590627 SYCP3Q8IZU3 236 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 CRIPAKQ8N1N5 446 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 LINC01599Q8WXQ3 324 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 MRPL4Q9BYD3 311 aaKnown RBP18.13■□□□□ 0.49
GCDH-213ENST00000590627 CBX8Q9HC52 389 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 PADI3Q9ULW8 664 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 GINS2Q9Y248 185 aa18.13■□□□□ 0.49
GCDH-213ENST00000590627 CALUO43852 315 aaPredicted RBP18.12■□□□□ 0.49
GCDH-213ENST00000590627 STAG3L1P0CL83 205 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 LTBRP36941 435 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 MYL5Q02045 173 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 MYBPC2Q14324 1141 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 SPATA1Q5VX52 437 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 HS2ST1Q7LGA3 356 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 RTN4RL1Q86UN2 441 aaPredicted RBP18.12■□□□□ 0.49
GCDH-213ENST00000590627 DHX40Q8IX18 779 aaKnown RBP18.12■□□□□ 0.49
GCDH-213ENST00000590627 C12orf56Q8IXR9 622 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 TMEM40Q8WWA1 233 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 TSG101Q99816 390 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 DUSP9Q99956 384 aaKnown RBP18.12■□□□□ 0.49
GCDH-213ENST00000590627 AGPAT3Q9NRZ7 376 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 STYXL1Q9Y6J8 313 aa18.12■□□□□ 0.49
GCDH-213ENST00000590627 TRIM49BA6NDI0 452 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 FAM86C2PA6NEL3 165 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 SMTNL1A8MU46 457 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 EDN1P05305 212 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 SFPQP23246 707 aaKnown RBP eCLIP18.11■□□□□ 0.49
GCDH-213ENST00000590627 STX17P56962 302 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 ZP2Q05996 745 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 HYAL1Q12794 435 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 PRPF4BQ13523 1007 aaKnown RBP18.11■□□□□ 0.49
GCDH-213ENST00000590627 NCAPHQ15003 741 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 SLC9A9Q8IVB4 645 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 ZC3H3Q8IXZ2 948 aaKnown RBP18.11■□□□□ 0.49
GCDH-213ENST00000590627 ACO2Q99798 780 aaKnown RBP18.11■□□□□ 0.49
GCDH-213ENST00000590627 IKZF4Q9H2S9 585 aa18.11■□□□□ 0.49
GCDH-213ENST00000590627 PTPRHQ9HD43 1115 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms