RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ARHGAP18Q8N392 663 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 LNX1Q8TBB1 728 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 FBXO41Q8TF61 875 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 IQCDQ96DY2 449 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 KLF6Q99612 283 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 TFCP2L1Q9NZI6 479 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 AIPL1Q9NZN9 384 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 COG5Q9UP83 839 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 ASLP04424 464 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 PTPN4P29074 926 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 ECM1Q16610 540 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 GUF1Q8N442 669 aaKnown RBP16.18■□□□□ 0.18
CIRBP-228ENST00000590347 NAT14Q8WUY8 206 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
CIRBP-228ENST00000590347 LRRN2O75325 713 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 RARGP13631 454 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 SKIV2L2P42285 1042 aaKnown RBP16.18■□□□□ 0.18
CIRBP-228ENST00000590347 CALCOCO2Q13137 446 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 ARHGAP44Q17R89 818 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 KCTD21Q4G0X4 260 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 UNC13DQ70J99 1090 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 SNX29Q8TEQ0 813 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
CIRBP-228ENST00000590347 PNMA5Q96PV4 448 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 TUT1Q9H6E5 874 aaKnown RBP16.18■□□□□ 0.18
CIRBP-228ENST00000590347 ACP6Q9NPH0 428 aa16.18■□□□□ 0.18
CIRBP-228ENST00000590347 GOLGA8RI6L899 631 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 CCR3P51677 355 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 SLC35G1Q2M3R5 365 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 MIPOL1Q8TD10 442 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 ZNF180Q9UJW8 692 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 HDAC9Q9UKV0 1011 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 TMCO1Q9UM00 188 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.17■□□□□ 0.18
CIRBP-228ENST00000590347 TSPY2A6NKD2 308 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 IL9RQ01113 521 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 STRN3Q13033 797 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 COASYQ13057 564 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 ARHGEF18Q6ZSZ5 1173 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 CFAP61Q8NHU2 1237 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 PRPF31Q8WWY3 499 aaKnown RBP16.17■□□□□ 0.18
CIRBP-228ENST00000590347 FNBP1Q96RU3 617 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 CENPKQ9BS16 269 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 CLIC2O15247 247 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 TMCC1O94876 653 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 ATP6V1B1P15313 513 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 OCRLQ01968 901 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 HERC4Q5GLZ8 1057 aaPredicted RBP16.17■□□□□ 0.18
CIRBP-228ENST00000590347 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 SCUBE1Q8IWY4 988 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 CTNNBL1Q8WYA6 563 aaPredicted RBP16.17■□□□□ 0.18
CIRBP-228ENST00000590347 HAUS1Q96CS2 278 aa16.17■□□□□ 0.18
CIRBP-228ENST00000590347 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 MYH3P11055 1940 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 GSC2O15499 205 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 NR2F2P24468 414 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 RPA3P35244 121 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-228ENST00000590347 LRRC63Q05C16 580 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 MARK2Q7KZI7 788 aaKnown RBP16.16■□□□□ 0.18
CIRBP-228ENST00000590347 SIKE1Q9BRV8 207 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 CNOT7Q9UIV1 285 aaKnown RBP16.16■□□□□ 0.18
CIRBP-228ENST00000590347 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 COL14A1Q05707 1796 aaKnown RBP16.16■□□□□ 0.18
CIRBP-228ENST00000590347 UTRNP46939 3433 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 CES2O00748 559 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 FGFR2P21802 821 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 CETN2P41208 172 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 YARSP54577 528 aaKnown RBP16.16■□□□□ 0.18
CIRBP-228ENST00000590347 SLC1A5Q15758 541 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 TNFAIP8L3Q5GJ75 292 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 FAM26FQ5R3K3 315 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 FAM182AQ5T1J6 154 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 CLNKQ7Z7G1 428 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 TRIM59Q8IWR1 403 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 RNF168Q8IYW5 571 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-228ENST00000590347 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-228ENST00000590347 DOLKQ9UPQ8 538 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 ALG6Q9Y672 507 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 MROH5Q6ZUA9 1318 aa16.16■□□□□ 0.18
CIRBP-228ENST00000590347 PHF2O75151 1096 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 TDP2O95551 362 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 KRT15P19012 456 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 CA4P22748 312 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 CASP4P49662 377 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 CASP5P51878 434 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 AP1B1Q10567 949 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 LPCAT4Q643R3 524 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 NSMFQ6X4W1 530 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 TRIM67Q6ZTA4 783 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 RAPH1Q70E73 1250 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 OTOAQ7RTW8 1153 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 SMC1BQ8NDV3 1235 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 INPP5DQ92835 1189 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 GPR101Q96P66 508 aaPredicted RBP16.15■□□□□ 0.18
CIRBP-228ENST00000590347 IWS1Q96ST2 819 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 HEY2Q9UBP5 337 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 NID2Q14112 1375 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 MAGEB6P1A0A0J9YX57 407 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 E9PMD0 336 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms