RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TMEM161BQ8NDZ6 487 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 LRRC15Q8TF66 581 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 LARP4BQ92615 738 aaKnown RBP13.26□□□□□ -0.29
TPM4-212ENST00000590180 ZBTB45Q96K62 511 aaPredicted RBP13.26□□□□□ -0.29
TPM4-212ENST00000590180 REEP2Q9BRK0 252 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 CCDC94Q9BW85 323 aaPredicted RBP13.26□□□□□ -0.29
TPM4-212ENST00000590180 STK39Q9UEW8 545 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 ODF2LQ9ULJ1 636 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 C2CD2LO14523 706 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 SPTLC2O15270 562 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 TBCAO75347 108 aaKnown RBP13.25□□□□□ -0.29
TPM4-212ENST00000590180 GLP2RO95838 553 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 MAPTP10636 758 aaKnown RBP13.25□□□□□ -0.29
TPM4-212ENST00000590180 KLRC2P26717 231 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 NASPP49321 788 aaPredicted RBP13.25□□□□□ -0.29
TPM4-212ENST00000590180 YARSP54577 528 aaKnown RBP13.25□□□□□ -0.29
TPM4-212ENST00000590180 COASYQ13057 564 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 TUSC3Q13454 348 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 SMAD4Q13485 552 aaKnown RBP13.25□□□□□ -0.29
TPM4-212ENST00000590180 KIAA1841Q6NSI8 718 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 CCDC73Q6ZRK6 1079 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 SV2BQ7L1I2 683 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 DYMQ7RTS9 669 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 TAS1R1Q7RTX1 841 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 HAUS6Q7Z4H7 955 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 LINC00301Q8NCQ3 95 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 VN1R2Q8NFZ6 395 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 BICD1Q96G01 975 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 MSLNLQ96KJ4 702 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 APOL5Q9BWW9 433 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 VN1R3Q9BXE9 311 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 EMILIN2Q9BXX0 1053 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 CDT1Q9H211 546 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 CXCL16Q9H2A7 254 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 PARVGQ9HBI0 331 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 PTPRHQ9HD43 1115 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 MRPL17Q9NRX2 175 aaKnown RBP13.25□□□□□ -0.29
TPM4-212ENST00000590180 MARCH5Q9NX47 278 aa13.25□□□□□ -0.29
TPM4-212ENST00000590180 SPTBN5Q9NRC6 3674 aaKnown RBP13.25□□□□□ -0.29
TPM4-212ENST00000590180 BDP1A6H8Y1 2624 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 CASTOR2A6NHX0 329 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 F8W810 466 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 TRAK2O60296 914 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 F13A1P00488 732 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 SOD2P04179 222 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 MCF2P10911 925 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 GRM5P41594 1212 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 STAT6P42226 847 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
TPM4-212ENST00000590180 ANKRD54Q6NXT1 300 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 MPZL3Q6UWV2 235 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 TMEM184AQ6ZMB5 413 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 GJD3Q8N144 294 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 PDILTQ8N807 584 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 CEP120Q8N960 986 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 CASP10Q92851 521 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 ACAP3Q96P50 834 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 KLHL5Q96PQ7 755 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 ANKFY1Q9P2R3 1169 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 STK17AQ9UEE5 414 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 SSX2IPQ9Y2D8 614 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 HCFC2Q9Y5Z7 792 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 IRAK3Q9Y616 596 aa13.24□□□□□ -0.29
TPM4-212ENST00000590180 REV3LO60673 3130 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 K7ENM7 598 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 PTGESO14684 152 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 CLDN3O15551 220 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 TOM1L1O75674 476 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 URODP06132 367 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 NMT1P30419 496 aaKnown RBP13.23□□□□□ -0.29
TPM4-212ENST00000590180 NCKAP1LP55160 1127 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 KCNC3Q14003 757 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 HSP90AA2PQ14568 343 aaPredicted RBP13.23□□□□□ -0.29
TPM4-212ENST00000590180 PTPN14Q15678 1187 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 GLRA4Q5JXX5 417 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 PAAF1Q9BRP4 392 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 HERC2P3Q9BVR0 1158 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 GPR62Q9BZJ7 368 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 CD320Q9NPF0 282 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 TOPORSQ9NS56 1045 aaPredicted RBP13.23□□□□□ -0.29
TPM4-212ENST00000590180 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 TBX20Q9UMR3 447 aa13.23□□□□□ -0.29
TPM4-212ENST00000590180 MORC2Q9Y6X9 1032 aaPredicted RBP13.23□□□□□ -0.29
TPM4-212ENST00000590180 ZMYM2Q9UBW7 1377 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 SMIM28A0A1B0GU29 152 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 MYMKA6NI61 221 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 PPP6R2O75170 966 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 YEATS4O95619 227 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 CNPP09543 421 aaKnown RBP13.22□□□□□ -0.29
TPM4-212ENST00000590180 HOXB8P17481 243 aaPredicted RBP13.22□□□□□ -0.29
TPM4-212ENST00000590180 PROZP22891 400 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 GLUD2P49448 558 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 LIG4P49917 911 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 ZNF131P52739 623 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 PKP1Q13835 747 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 USP41Q3LFD5 358 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 TPRNQ4KMQ1 711 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 SEZ6Q53EL9 994 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms