RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 GOLGA8IPA6NC78 632 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 TRIM49BA6NDI0 452 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 GOLGA8JA6NMD2 632 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 HOXA2O43364 376 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 EXTL3O43909 919 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 FAM189A1O60320 539 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 RECQL4O94761 1208 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 LDHAP00338 332 aaKnown RBP16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 CLTAP09496 248 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 TNFSF9P41273 254 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 ACOT2P49753 483 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 GATMP50440 423 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 PMS1P54277 932 aaKnown RBP16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 STX17P56962 302 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 LRRC63Q05C16 580 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 TYRO3Q06418 890 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 EDRF1Q3B7T1 1238 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 PRPF38BQ5VTL8 546 aaKnown RBP16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 ANKRD40Q6AI12 368 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 ABI1Q8IZP0 508 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 GPD1LQ8N335 351 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 ZSWIM2Q8NEG5 633 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 HELQQ8TDG4 1101 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 RNF19AQ9NV58 838 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 ANO10Q9NW15 660 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 KLK14Q9P0G3 267 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 GIT1Q9Y2X7 761 aa16.86■□□□□ 0.29
RPRD1A-208ENST00000589050 EXOC3O60645 756 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 DGKIO75912 1065 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 GJB5O95377 273 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 NR2F2P24468 414 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 RPL13P26373 211 aaKnown RBP16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 MLH1P40692 756 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 NFIL3Q16649 462 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 CLLU1OSQ5K130 101 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 FAM109BQ6ICB4 259 aaPredicted RBP16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 GLB1LQ6UWU2 654 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 SLC9A9Q8IVB4 645 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 XXYLT1Q8NBI6 393 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 YME1L1Q96TA2 773 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 RPF1Q9H9Y2 349 aaKnown RBP16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 TOPORSQ9NS56 1045 aaPredicted RBP16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 DMAC2Q9NW81 257 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 RWDD2AQ9UIY3 292 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 CPSF3Q9UKF6 684 aaKnown RBP16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 INPP5FQ9Y2H2 1132 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 MICAL3Q7RTP6 2002 aa16.85■□□□□ 0.29
RPRD1A-208ENST00000589050 ARL5CA6NH57 179 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 TBKBP1A7MCY6 615 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 GRXCR1A8MXD5 290 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 TULP1O00294 542 aaPredicted RBP16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 OFD1O75665 1012 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 CCDC192P0DO97 292 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 CXCL8P10145 99 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 MYBPC2Q14324 1141 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 HSP90AA2PQ14568 343 aaPredicted RBP16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 ENOX2Q16206 610 aaKnown RBP16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 TTI2Q6NXR4 508 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 CRELD2Q6UXH1 353 aaPredicted RBP16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 RDH13Q8NBN7 331 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 URGCPQ8TCY9 931 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 TMEM174Q8WUU8 243 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 SNX27Q96L92 541 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 ZFP42Q96MM3 310 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 RPS6KC1Q96S38 1066 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 GAD1Q99259 594 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 TMEM117Q9H0C3 514 aa16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 COLQQ9Y215 455 aaPredicted RBP16.84■□□□□ 0.29
RPRD1A-208ENST00000589050 TLL1O43897 1013 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 RABGGTBP53611 331 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 PPP2R3AQ06190 1150 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 ADAM9Q13443 819 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 SNRNP35Q16560 246 aaKnown RBP16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 SLC10A6Q3KNW5 377 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 PAN2Q504Q3 1202 aaKnown RBP16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 NOMO2Q5JPE7 1267 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 CT47A1Q5JQC4 288 aaPredicted RBP16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 CEP135Q66GS9 1140 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 C11orf57Q6ZUT1 292 aaPredicted RBP16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 CBWD2Q8IUF1 395 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 ZNF689Q96CS4 500 aaPredicted RBP16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 FAM212AQ96EL1 285 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 FBXL18Q96ME1 805 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 CASD1Q96PB1 797 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 RAD9AQ99638 391 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 DUSP9Q99956 384 aaKnown RBP16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 RC3H2Q9HBD1 1191 aaKnown RBP16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 RBAKQ9NYW8 714 aaPredicted RBP16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 FRMD4BQ9Y2L6 1034 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 INSL6Q9Y581 213 aa16.83■□□□□ 0.28
RPRD1A-208ENST00000589050 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.82■□□□□ 0.28
RPRD1A-208ENST00000589050 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.82■□□□□ 0.28
RPRD1A-208ENST00000589050 ZNF233A6NK53 670 aa16.82■□□□□ 0.28
RPRD1A-208ENST00000589050 LACTBL1A8MY62 500 aa16.82■□□□□ 0.28
RPRD1A-208ENST00000589050 CETN3O15182 167 aa16.82■□□□□ 0.28
RPRD1A-208ENST00000589050 MEFVO15553 781 aaPredicted RBP16.82■□□□□ 0.28
RPRD1A-208ENST00000589050 POMCP01189 267 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms