RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 VTI1AQ96AJ9 217 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ZIC5Q96T25 663 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 POP1Q99575 1024 aaKnown RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 JPH2Q9BR39 696 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 MSTO1Q9BUK6 570 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 TUBB2BQ9BVA1 445 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 TARS2Q9BW92 718 aaKnown RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 GPR88Q9GZN0 384 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 KATNBL1Q9H079 304 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 KIAA1586Q9HCI6 787 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 TMEM8AQ9HCN3 771 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 UBE2TQ9NPD8 197 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.49□□□□□ -0.893e-9■■■■■ 48.4
SMAD4-206ENST00000588860 SLC5A4Q9NY91 659 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ERAP1Q9NZ08 941 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 SUCLA2Q9P2R7 463 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 CDC23Q9UJX2 597 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 AGO2Q9UKV8 859 aaKnown RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 STYXL1Q9Y6J8 313 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ADGRA2Q96PE1 1338 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 RALGAPA2Q2PPJ7 1873 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 IGKV6-21A0A0C4DH24 114 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 IGF2BP3O00425 579 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 EVI5O60447 810 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 LRRN2O75325 713 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 TADA3O75528 432 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 ATP1A1P05023 1023 aaKnown RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 EDN1P05305 212 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 PRKCBP05771 671 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 CCDC172P0C7W6 258 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 DLATP10515 647 aaKnown RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 HARSP12081 509 aaKnown RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 EFNA5P52803 228 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 NAP1L1P55209 391 aaKnown RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 NLRP11P59045 1033 aaKnown RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 MCCD1P59942 119 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 IGBP1P78318 339 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 ENPEPQ07075 957 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 TFDP1Q14186 410 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 MXD4Q14582 209 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 PSMD6Q15008 389 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 ZNF484Q5JVG2 852 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 C10orf76Q5T2E6 689 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 CDCA2Q69YH5 1023 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 KRT39Q6A163 491 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 RGMBQ6NW40 437 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 EFCAB12Q6NXP0 572 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 RHPN2Q8IUC4 686 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 METTL13Q8N6R0 699 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 NPLOC4Q8TAT6 608 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 ANKRD7Q92527 254 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 SEMA4DQ92854 862 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 EMID1Q96A84 441 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 ZBTB45Q96K62 511 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 ALS2CR12Q96Q35 445 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 TINF2Q9BSI4 451 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 MRPL4Q9BYD3 311 aaKnown RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 CCDC113Q9H0I3 377 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 C2orf40Q9H1Z8 148 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 SAGE1Q9NXZ1 904 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 HCSTQ9UBK5 93 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 ADAMTS1Q9UHI8 967 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 PDCD11Q14690 1871 aaKnown RBP9.48□□□□□ -0.89
SMAD4-206ENST00000588860 COL1A2P08123 1366 aa9.48□□□□□ -0.89
SMAD4-206ENST00000588860 A0A0B4J269 797 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ENC1O14682 589 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 C22orf31O95567 290 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 LDHAP00338 332 aaKnown RBP9.47□□□□□ -0.89
SMAD4-206ENST00000588860 SLC10A3P09131 477 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 SMPD1P17405 629 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 USP8P40818 1118 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ACOT2P49753 483 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 CLCN3P51790 818 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 AMPD2Q01433 879 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ACVR2BQ13705 512 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 KIF22Q14807 665 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 NAB2Q15742 525 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 MAPK6Q16659 721 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 WHAMMP3Q1A5X7 153 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ZBTB41Q5SVQ8 909 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 TEX35Q5T0J7 233 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 TRAPPC11Q7Z392 1133 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ZBTB33Q86T24 672 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 CEP112Q8N8E3 955 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 RNF149Q8NC42 400 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 FBXL13Q8NEE6 735 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 TRIM58Q8NG06 486 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 LNX1Q8TBB1 728 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-206ENST00000588860 TAS1R2Q8TE23 839 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 U2AF1L4Q8WU68 220 aaKnown RBP9.47□□□□□ -0.89
SMAD4-206ENST00000588860 GOLGA1Q92805 767 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 ZBTB10Q96DT7 871 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 NLRP4Q96MN2 994 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 NT5C1BQ96P26 610 aa9.47□□□□□ -0.89
SMAD4-206ENST00000588860 NOX5Q96PH1 765 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms