RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 RTP2Q5QGT7 225 aa24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 Q6ZUG5 572 aa24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 FERMT3Q86UX7 667 aa24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 RASEFQ8IZ41 740 aa24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 ING5Q8WYH8 240 aa24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 BRF1Q92994 677 aa24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 NXF3Q9H4D5 531 aaKnown RBP24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 DHX33Q9H6R0 707 aaKnown RBP24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 PARD6AQ9NPB6 346 aa24.25■■□□□ 1.47
CAPNS1-205ENST00000588780 PSMD5Q16401 504 aa24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 B3GNT9Q6UX72 402 aa24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 PRR23BQ6ZRT6 265 aa24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 TTPALQ9BTX7 342 aa24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 FAM126AQ9BYI3 521 aaPredicted RBP24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 CACNG4Q9UBN1 327 aa24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 DDX25Q9UHL0 483 aaKnown RBP24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 PPME1Q9Y570 386 aa24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.24■■□□□ 1.47
CAPNS1-205ENST00000588780 CHD8Q9HCK8 2581 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 EML1O00423 815 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 CPA1P15085 419 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 GRIK3Q13003 919 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 MTAPQ13126 283 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 TFDP1Q14186 410 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 HSP90AA2PQ14568 343 aaPredicted RBP24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 PPP2R5DQ14738 602 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 PCBP1Q15365 356 aaKnown RBP eCLIP24.23■■□□□ 1.472e-8■■■□□ 17.3
CAPNS1-205ENST00000588780 PABPC1LQ4VXU2 614 aaKnown RBP24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 XKR9Q5GH70 373 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 FAM171A1Q5VUB5 890 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 OTUD6AQ7L8S5 288 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 SLC7A14Q8TBB6 771 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 ETNPPLQ8TBG4 499 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 CLDN23Q96B33 292 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 MTRQ99707 1265 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 RNF26Q9BY78 433 aaPredicted RBP24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 HEBP1Q9NRV9 189 aa24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 NDRG2Q9UN36 371 aaKnown RBP24.23■■□□□ 1.47
CAPNS1-205ENST00000588780 CYP3A7-CYP3A51PA0A087WV96 503 aa24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 MARCH6O60337 910 aa24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 P4HBP07237 508 aaKnown RBP24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 CYP3A7P24462 503 aa24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 RPS9P46781 194 aaKnown RBP24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 NRLP54845 237 aa24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 ADCY1Q08828 1119 aa24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 NETO1Q8TDF5 533 aa24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 CLSTN3Q9BQT9 956 aa24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 HCFC1R1Q9NWW0 138 aa24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 MRPS23Q9Y3D9 190 aaKnown RBP24.22■■□□□ 1.47
CAPNS1-205ENST00000588780 NPTXRO95502 500 aa24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 TGM1P22735 817 aa24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 YWHABP31946 246 aaKnown RBP24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 AXDND1Q5T1B0 1012 aaPredicted RBP24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 CDR2LQ86X02 465 aaPredicted RBP24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 NPAS3Q8IXF0 933 aa24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 NELL1Q92832 810 aa24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 MCRS1Q96EZ8 462 aa24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 PRMT8Q9NR22 394 aaPredicted RBP24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 SH3GLB2Q9NR46 395 aa24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 PCDHA4Q9UN74 947 aa24.21■■□□□ 1.47
CAPNS1-205ENST00000588780 CASTOR2A6NHX0 329 aa24.2■■□□□ 1.46
CAPNS1-205ENST00000588780 HOXA9P31269 272 aa24.2■■□□□ 1.46
CAPNS1-205ENST00000588780 PTENP60484 403 aa24.2■■□□□ 1.46
CAPNS1-205ENST00000588780 MXD4Q14582 209 aaPredicted RBP24.2■■□□□ 1.46
CAPNS1-205ENST00000588780 LAIR1Q6GTX8 287 aa24.2■■□□□ 1.46
CAPNS1-205ENST00000588780 LXNQ9BS40 222 aa24.2■■□□□ 1.46
CAPNS1-205ENST00000588780 SLC30A4O14863 429 aa24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 ARF4P18085 180 aaPredicted RBP24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 TSGA10IPQ3SY00 556 aa24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 TRIM22Q8IYM9 498 aa24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 BLIDQ8IZY5 108 aa24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 GSTCDQ8NEC7 633 aa24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 LNX1Q8TBB1 728 aaPredicted RBP24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 PIK3R5Q8WYR1 880 aa24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 PAAF1Q9BRP4 392 aa24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 WRAP73Q9P2S5 460 aaPredicted RBP24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 KCNH3Q9ULD8 1083 aa24.19■■□□□ 1.46
CAPNS1-205ENST00000588780 CCT2P78371 535 aaKnown RBP24.18■■□□□ 1.46
CAPNS1-205ENST00000588780 PPP2R5CQ13362 524 aa24.18■■□□□ 1.46
CAPNS1-205ENST00000588780 PDXDC1Q6P996 788 aa24.18■■□□□ 1.46
CAPNS1-205ENST00000588780 MOXD1Q6UVY6 613 aa24.18■■□□□ 1.46
CAPNS1-205ENST00000588780 CELF5Q8N6W0 485 aaKnown RBP24.18■■□□□ 1.46
CAPNS1-205ENST00000588780 DNMT3BQ9UBC3 853 aaKnown RBP24.18■■□□□ 1.46
CAPNS1-205ENST00000588780 ADAM12O43184 909 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 SLC37A4O43826 429 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 ECI2O75521 394 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 KIF4AO95239 1232 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 IFNAR1P17181 557 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 OR1D2P34982 312 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 DMWDQ09019 674 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 TUSC3Q13454 348 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 INF2Q27J81 1249 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 NCAPH2Q6IBW4 605 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 SLC27A1Q6PCB7 646 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 C4orf19Q8IY42 314 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 CCDC43Q96MW1 224 aaKnown RBP24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 JAKMIP1Q96N16 626 aaKnown RBP24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 PLA2G2FQ9BZM2 168 aa24.17■■□□□ 1.46
CAPNS1-205ENST00000588780 BRD9Q9H8M2 597 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms