RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 UNC93B1Q9H1C4 597 aa28.26■■■□□ 2.11
SCAMP4-210ENST00000588555 ERLIN2O94905 339 aa28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 MSNP26038 577 aaKnown RBP28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 GTF2H1P32780 548 aa28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 MXI1P50539 228 aa28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 ITGA7Q13683 1181 aa28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 SNX17Q15036 470 aa28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 PCBP1Q15365 356 aaKnown RBP eCLIP28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 TMEM132AQ24JP5 1023 aa28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 KLHDC7AQ5VTJ3 777 aa28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 BRSK2Q8IWQ3 736 aa28.25■■■□□ 2.11
SCAMP4-210ENST00000588555 A0A1B0GUA9 196 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 NRDCO43847 1150 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 DLATP10515 647 aaKnown RBP28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 EPC2Q52LR7 807 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 ZNF397Q8NF99 534 aaPredicted RBP28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 TMEM8AQ9HCN3 771 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 PDE11AQ9HCR9 933 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 PAK6Q9NQU5 681 aaPredicted RBP28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 MCF2P10911 925 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 HOXA11P31270 313 aaPredicted RBP28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 CRYBB1P53674 252 aaPredicted RBP28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 POLR2FP61218 127 aaKnown RBP28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 WDR59Q6PJI9 974 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 RPAINQ86UA6 219 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 CEP120Q8N960 986 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 NAA15Q9BXJ9 866 aaKnown RBP28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 INTS2Q9H0H0 1204 aaKnown RBP28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 FBXL5Q9UKA1 691 aa28.24■■■□□ 2.11
SCAMP4-210ENST00000588555 UCHL3P15374 230 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 MEA1Q16626 185 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 KRT39Q6A163 491 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 C15orf39Q6ZRI6 1047 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 ARRDC4Q8NCT1 418 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 ZNF516Q92618 1163 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 GLT1D1Q96MS3 346 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 COQ4Q9Y3A0 265 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 PTPRJQ12913 1337 aa28.23■■■□□ 2.11
SCAMP4-210ENST00000588555 ARHGAP6O43182 974 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 HNRNPH3P31942 346 aaKnown RBP28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 KCNJ6P48051 423 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 MRPS6P82932 125 aaKnown RBP28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 PTPN11Q06124 597 aaPredicted RBP28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 CATSPER4Q7RTX7 472 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 THNSL1Q8IYQ7 743 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 EHBP1Q8NDI1 1231 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 CELF4Q9BZC1 486 aaKnown RBP28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 NLRC4Q9NPP4 1024 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 PLAGL2Q9UPG8 496 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 A0A1W2PQ45 241 aaPredicted RBP28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 A0A1W2PQY0 241 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 MTFR1Q15390 333 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 PTGISQ16647 500 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 SLC9C1Q4G0N8 1177 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 E4F1Q66K89 784 aaPredicted RBP28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 PDXDC1Q6P996 788 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 SV2AQ7L0J3 742 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 CACNA2D4Q7Z3S7 1137 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 VTI1AQ96AJ9 217 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 FNBP1Q96RU3 617 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 FHOD1Q9Y613 1164 aa28.22■■■□□ 2.11
SCAMP4-210ENST00000588555 LRRC53A6NM62 1247 aa28.21■■■□□ 2.11
SCAMP4-210ENST00000588555 CETN1Q12798 172 aa28.21■■■□□ 2.11
SCAMP4-210ENST00000588555 RRAGAQ7L523 313 aa28.21■■■□□ 2.11
SCAMP4-210ENST00000588555 C17orf53Q8N3J3 647 aaPredicted RBP28.21■■■□□ 2.11
SCAMP4-210ENST00000588555 FAM84AQ96KN4 292 aa28.21■■■□□ 2.11
SCAMP4-210ENST00000588555 CGRRF1Q99675 332 aa28.21■■■□□ 2.11
SCAMP4-210ENST00000588555 PHF24Q9UPV7 400 aa28.21■■■□□ 2.11
SCAMP4-210ENST00000588555 LRRN2O75325 713 aa28.2■■■□□ 2.11
SCAMP4-210ENST00000588555 RPLP2P05387 115 aaKnown RBP28.2■■■□□ 2.11
SCAMP4-210ENST00000588555 ENOX2Q16206 610 aaKnown RBP28.2■■■□□ 2.11
SCAMP4-210ENST00000588555 RSPH3Q86UC2 560 aa28.2■■■□□ 2.11
SCAMP4-210ENST00000588555 TMEM192Q8IY95 271 aa28.2■■■□□ 2.11
SCAMP4-210ENST00000588555 SLC43A3Q8NBI5 491 aa28.2■■■□□ 2.11
SCAMP4-210ENST00000588555 AJAP1Q9UKB5 411 aaPredicted RBP28.2■■■□□ 2.11
SCAMP4-210ENST00000588555 ANK1P16157 1881 aa28.2■■■□□ 2.1
SCAMP4-210ENST00000588555 LMBRD2Q68DH5 695 aaPredicted RBP28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 CDY2AQ9Y6F7 541 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 SOWAHDA6NJG2 315 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 ZNF500O60304 480 aaPredicted RBP28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 TNNI1P19237 187 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 GJB7Q6PEY0 223 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 TMTC1Q8IUR5 882 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 TAS1R2Q8TE23 839 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 SEMA4DQ92854 862 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 CHP1Q99653 195 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 TRMT13Q9NUP7 481 aaKnown RBP28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 APEX2Q9UBZ4 518 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 TRPV2Q9Y5S1 764 aa28.19■■■□□ 2.1
SCAMP4-210ENST00000588555 C4BPAP04003 597 aaKnown RBP28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 OSTNP61366 133 aa28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 MGAT3Q09327 533 aa28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 TSR1Q2NL82 804 aaKnown RBP28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 ZACNQ401N2 412 aa28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 IQCEQ6IPM2 695 aa28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 CYP26C1Q6V0L0 522 aa28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 FBXL13Q8NEE6 735 aa28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 ADPGKQ9BRR6 497 aa28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 SENP6Q9GZR1 1112 aaPredicted RBP28.18■■■□□ 2.1
SCAMP4-210ENST00000588555 TULP1O00294 542 aaPredicted RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms