RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 DNAJB4Q9UDY4 337 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 KCNH3Q9ULD8 1083 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 COL4A4P53420 1690 aaPredicted RBP11.07□□□□□ -0.64
TPM4-207ENST00000588032 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 MYH15Q9Y2K3 1946 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 FRMD3A2A2Y4 597 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 NT5C1B-RDH14C9J2C7 533 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 ABLIM1O14639 778 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 HNRNPDLO14979 420 aaKnown RBP11.06□□□□□ -0.64
TPM4-207ENST00000588032 IDEP14735 1019 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 PBX3P40426 434 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 SLC11A1P49279 550 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 LIG4P49917 911 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 ERVFC1P60507 584 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 MCL1Q07820 350 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 TUSC3Q13454 348 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
TPM4-207ENST00000588032 NOLC1Q14978 699 aaKnown RBP eCLIP11.06□□□□□ -0.64
TPM4-207ENST00000588032 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
TPM4-207ENST00000588032 SLFN12LQ6IEE8 588 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 STXBP4Q6ZWJ1 553 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 TMC7Q7Z402 723 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 ZBTB33Q86T24 672 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 SFR1Q86XK3 245 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 MAP4K3Q8IVH8 894 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 CEP57L1Q8IYX8 460 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 PABPC5Q96DU9 382 aaKnown RBP11.06□□□□□ -0.64
TPM4-207ENST00000588032 TSPAN18Q96SJ8 248 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 C7orf25Q9BPX7 421 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 TCF25Q9BQ70 676 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 TLE6Q9H808 572 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 MRPL44Q9H9J2 332 aaKnown RBP11.06□□□□□ -0.64
TPM4-207ENST00000588032 PLEKHA5Q9HAU0 1116 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 PLSCR2Q9NRY7 297 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 EXOC7Q9UPT5 735 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 SSX2IPQ9Y2D8 614 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 GDAQ9Y2T3 454 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.06□□□□□ -0.64
TPM4-207ENST00000588032 SZT2Q5T011 3432 aa11.06□□□□□ -0.64
TPM4-207ENST00000588032 A0A1W2PQ27 194 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 A0A1W2PQ64 194 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 A0A1W2PQD8 194 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 CLTAP09496 248 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 SLFN14P0C7P3 912 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 NMT1P30419 496 aaKnown RBP11.05□□□□□ -0.64
TPM4-207ENST00000588032 IRS1P35568 1242 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 MATR3P43243 847 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM4-207ENST00000588032 OR1G1P47890 313 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 HYAL1Q12794 435 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 POSTNQ15063 836 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 CTC1Q2NKJ3 1217 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
TPM4-207ENST00000588032 XKR4Q5GH76 650 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 ALKAL1Q6UXT8 129 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 VPS52Q8N1B4 723 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 EFHBQ8N7U6 833 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 MRPL43Q8N983 215 aaKnown RBP11.05□□□□□ -0.64
TPM4-207ENST00000588032 ZBTB45Q96K62 511 aaPredicted RBP11.05□□□□□ -0.64
TPM4-207ENST00000588032 ASB2Q96Q27 587 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 STRA6Q9BX79 667 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 TRIM9Q9C026 710 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 PRDM6Q9NQX0 595 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 ENTPD7Q9NQZ7 604 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 SLC38A7Q9NVC3 462 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 ANKFY1Q9P2R3 1169 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 CIZ1Q9ULV3 898 aaPredicted RBP11.05□□□□□ -0.64
TPM4-207ENST00000588032 IRAK3Q9Y616 596 aa11.05□□□□□ -0.64
TPM4-207ENST00000588032 A0A0B4J269 797 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 FAM237AA0A1B0GTK4 181 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 PVALEFA0A1B0GWK0 134 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 PTGESO14684 152 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 B4GALT3O60512 393 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 PPP1R37O75864 691 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 CXCL14O95715 111 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 MYL1P05976 194 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 SRGAP2BP0DMP2 458 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 CTSAP10619 480 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 KCNE1P15382 129 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 POU5F1Q01860 360 aaKnown RBP11.04□□□□□ -0.64
TPM4-207ENST00000588032 ADAM15Q13444 863 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 DUSP6Q16828 381 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 LEXMQ3ZCV2 418 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 ZC2HC1CQ53FD0 456 aaPredicted RBP11.04□□□□□ -0.64
TPM4-207ENST00000588032 TJAP1Q5JTD0 557 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 CD302Q8IX05 232 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 GPR65Q8IYL9 337 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 STAMQ92783 540 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 DDX27Q96GQ7 796 aaKnown RBP11.04□□□□□ -0.64
TPM4-207ENST00000588032 CCDC34Q96HJ3 373 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 UROC1Q96N76 676 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 ACCSQ96QU6 501 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 ZBP1Q9H171 429 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 TMEM206Q9H813 350 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 UBE2ZQ9H832 354 aaPredicted RBP11.04□□□□□ -0.64
TPM4-207ENST00000588032 HPSEQ9Y251 543 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 STYXL1Q9Y6J8 313 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 KIAA1671Q9BY89 1806 aa11.04□□□□□ -0.64
TPM4-207ENST00000588032 PRRC2BQ5JSZ5 2229 aaKnown RBP11.04□□□□□ -0.64
TPM4-207ENST00000588032 SMIM28A0A1B0GU29 152 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms