RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 NUP85Q9BW27 656 aa18.1■□□□□ 0.49
PRKCSH-205ENST00000587327 ACP6Q9NPH0 428 aa18.1■□□□□ 0.49
PRKCSH-205ENST00000587327 DHX15O43143 795 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 SPOPO43791 374 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 GHRP10912 638 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 FGFR4P22455 802 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 SIX1Q15475 284 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 PIGWQ7Z7B1 504 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 PPM1KQ8N3J5 372 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 EPS8L3Q8TE67 593 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 DEFB129Q9H1M3 183 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 MYOZ2Q9NPC6 264 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 INTS9Q9NV88 658 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 PKD2L1Q9P0L9 805 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 FEM1BQ9UK73 627 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 PTPN22Q9Y2R2 807 aa18.09■□□□□ 0.49
PRKCSH-205ENST00000587327 PASKQ96RG2 1323 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 ANKRD63C9JTQ0 380 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 ASNSP08243 561 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 MFAP3P55082 362 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 MCCD1P59942 119 aaPredicted RBP18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 SNRPFP62306 86 aaKnown RBP18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 FMO1Q01740 532 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 CYB5D1Q6P9G0 228 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 ANKS4BQ8N8V4 417 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 C12orf50Q8NA57 414 aaPredicted RBP18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 UHMK1Q8TAS1 419 aaKnown RBP18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 SHC3Q92529 594 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 HVCN1Q96D96 273 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 BTBD6Q96KE9 485 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 STMN4Q9H169 189 aaPredicted RBP18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 ST6GALNAC4Q9H4F1 302 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 CCDC134Q9H6E4 229 aa18.08■□□□□ 0.49
PRKCSH-205ENST00000587327 CCT8L1PA6NM43 557 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 RASGRF2O14827 1237 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 KCNJ1P48048 391 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 HSD17B4P51659 736 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 RWDD2BP57060 319 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 CIAPIN1Q6FI81 312 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 CPNE8Q86YQ8 564 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 SGSM3Q96HU1 749 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 CD248Q9HCU0 757 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.08■□□□□ 0.488e-7■■■■□ 23.9
PRKCSH-205ENST00000587327 PIM2Q9P1W9 311 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 UVRAGQ9P2Y5 699 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 GTF3C4Q9UKN8 822 aa18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 BRCA1P38398 1863 aaKnown RBP18.08■□□□□ 0.48
PRKCSH-205ENST00000587327 CYP11B1P15538 503 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 PTGER2P43116 358 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 SLCO1A2P46721 670 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 QARSP47897 775 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 MAP2K1Q02750 393 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 XRCC4Q13426 336 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 AUHQ13825 339 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 TNIP1Q15025 636 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 PRMT1Q99873 361 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 JPH2Q9BR39 696 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 ZNF341Q9BYN7 854 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 LRRC19Q9H756 370 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 HAUS2Q9NVX0 235 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 ATP2C2O75185 946 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 EGFRP00533 1210 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 ADRB2P07550 413 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 ITIH4Q14624 930 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 MFSD5Q6N075 450 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 PARP9Q8IXQ6 854 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 LRRC34Q8IZ02 419 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 SEMA4DQ92854 862 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 ZKSCAN4Q969J2 545 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 ZNF653Q96CK0 615 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 IWS1Q96ST2 819 aa18.07■□□□□ 0.48
PRKCSH-205ENST00000587327 ZNF536O15090 1300 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 GOLGA8IPA6NC78 632 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 GOLGA8JA6NMD2 632 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 DNAJC8O75937 253 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 LYPLA2O95372 231 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 ECEL1O95672 775 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 GSCP56915 257 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 CDR2Q01850 454 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 CALCOCO2Q13137 446 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 ZNF568Q3ZCX4 644 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 RNF207Q6ZRF8 634 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 NIPA1Q7RTP0 329 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 SLCO2A1Q92959 643 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 TEPSINQ96N21 525 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 NCAPGQ9BPX3 1015 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 ROPN1BQ9BZX4 212 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 ROPN1Q9HAT0 212 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 SLC16A4O15374 487 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 YWHABP31946 246 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 PEX3P56589 373 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 PPP1R7Q15435 360 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 SNRNP35Q16560 246 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 KRT39Q6A163 491 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 TRMT10CQ7L0Y3 403 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 TAOK1Q7L7X3 1001 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 CBWD2Q8IUF1 395 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 PSPC1Q8WXF1 523 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 AGBL1Q96MI9 1066 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms