RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
PRKCSH-204ENST00000587290 ZBTB8OSQ8IWT0 167 aa16.8■□□□□ 0.28
PRKCSH-204ENST00000587290 MCPH1Q8NEM0 835 aa16.8■□□□□ 0.28
PRKCSH-204ENST00000587290 SMG7Q92540 1137 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-204ENST00000587290 FZD8Q9H461 694 aa16.8■□□□□ 0.28
PRKCSH-204ENST00000587290 PRMT7Q9NVM4 692 aaPredicted RBP16.8■□□□□ 0.28
PRKCSH-204ENST00000587290 COL4A3Q01955 1670 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 ARHGEF35A5YM69 484 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 GALR2O43603 387 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 PI15O43692 258 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 TADA2AO75478 443 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 PRKCBP05771 671 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 XRCC6P12956 609 aaKnown RBP eCLIP16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 TDGQ13569 410 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 HSP90AA2PQ14568 343 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 USP41Q3LFD5 358 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 TTC38Q5R3I4 469 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 CMASQ8NFW8 434 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 POLR3CQ9BUI4 534 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 CCDC113Q9H0I3 377 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 WDR6Q9NNW5 1121 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 DUSP12Q9UNI6 340 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 SSX2IPQ9Y2D8 614 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 GDAQ9Y2T3 454 aa16.79■□□□□ 0.28
PRKCSH-204ENST00000587290 MYH11P35749 1972 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 GFRA3O60609 400 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 CFHP08603 1231 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 NPR3P17342 541 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 CYP11B2P19099 503 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 RPA1P27694 616 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 PRPF4BQ13523 1007 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 FAM187BQ17R55 369 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 GLRA4Q5JXX5 417 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 GET4Q7L5D6 327 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 CEP57Q86XR8 500 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 SIX5Q8N196 739 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 PRIMPOLQ96LW4 560 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 PIDD1Q9HB75 910 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 CITO14578 2027 aa16.78■□□□□ 0.28
PRKCSH-204ENST00000587290 NOTCH4Q99466 2003 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 SF3B1O75533 1304 aaKnown RBP eCLIP16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 PP2D1A8MPX8 630 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 N4BP3O15049 544 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 ADAM12O43184 909 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 CCT6AP40227 531 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 TUSC3Q13454 348 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 NAB2Q15742 525 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 MAPK6Q16659 721 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 FAM171A1Q5VUB5 890 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 LILRA6Q6PI73 481 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 ERMNQ8TAM6 284 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 DEPTORQ8TB45 409 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 NT5C3AQ9H0P0 336 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 BHMT2Q9H2M3 363 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 FOXP1Q9H334 677 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 FBXL21Q9UKT6 434 aa16.77■□□□□ 0.28
PRKCSH-204ENST00000587290 PTPRZ1P23471 2315 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 RIF1Q5UIP0 2472 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 NAMPTP43490 491 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 NTHL1P78549 312 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 GNL2Q13823 731 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 NT5DC1Q5TFE4 455 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 C4orf32Q8N8J7 132 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 FBXO18Q8NFZ0 1043 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 KIF2CQ99661 725 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 CLSTN3Q9BQT9 956 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 C2orf40Q9H1Z8 148 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 GOLGA2P5Q9HBQ8 144 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 FNIP2Q9P278 1114 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 CA14Q9ULX7 337 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 ZMYM2Q9UBW7 1377 aa16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 PDCD11Q14690 1871 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-204ENST00000587290 FAM186AA6NE01 2351 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 KRBA1A5PL33 1030 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 ACKR2O00590 384 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 THP07101 528 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 PSMD5Q16401 504 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 ASCL5Q7RTU5 278 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 CEP120Q8N960 986 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 PRKD2Q9BZL6 878 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 DDX19AQ9NUU7 478 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 KIAA1024Q9UPX6 916 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 PCDHB6Q9Y5E3 794 aa16.75■□□□□ 0.27
PRKCSH-204ENST00000587290 I3L4J1 428 aa16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 ZMYND10O75800 440 aa16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 CDC25AP30304 524 aa16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 IL17AQ16552 155 aa16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 HAUS3Q68CZ6 603 aa16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 ELMSAN1Q6PJG2 1045 aa16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 GRASPQ7Z6J2 395 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 LNX1Q8TBB1 728 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-204ENST00000587290 SNX29Q8TEQ0 813 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms