RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 BTN2A2Q8WVV5 523 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 CDC5LQ99459 802 aaKnown RBP5.75□□□□□ -1.49
ZNF540-204ENST00000586792 ANP32EQ9BTT0 268 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 TANGO6Q9C0B7 1094 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 NMRK2Q9NPI5 230 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 SMC4Q9NTJ3 1288 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 C9orf78Q9NZ63 289 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-204ENST00000586792 GIT1Q9Y2X7 761 aa5.75□□□□□ -1.49
ZNF540-204ENST00000586792 PTPRCP08575 1304 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 ZNF521Q96K83 1311 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 WDR90Q96KV7 1748 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 TLDC2A0PJX2 215 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 SLC27A2O14975 620 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 EIF3JO75822 258 aaKnown RBP5.74□□□□□ -1.49
ZNF540-204ENST00000586792 ITGAVP06756 1048 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 CT47B1P0C2W7 299 aaPredicted RBP5.74□□□□□ -1.49
ZNF540-204ENST00000586792 IGHMBP2P38935 993 aaKnown RBP5.74□□□□□ -1.49
ZNF540-204ENST00000586792 SLFN5Q08AF3 891 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 FOXL1Q12952 345 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 DUSP8Q13202 625 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 PTPROQ16827 1216 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 ZNF394Q53GI3 561 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 SGMS1Q86VZ5 419 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 ANKRD18AQ8IVF6 992 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 SMC1BQ8NDV3 1235 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 CCDC136Q96JN2 1154 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 EYA3Q99504 573 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 VPS33BQ9H267 617 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 PUF60Q9UHX1 559 aaKnown RBP5.74□□□□□ -1.49
ZNF540-204ENST00000586792 EFR3BQ9Y2G0 817 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 SCN4AP35499 1836 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 SPEF2Q9C093 1822 aa5.74□□□□□ -1.49
ZNF540-204ENST00000586792 DDNO94850 711 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-204ENST00000586792 RECKO95980 971 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 IGKV5-2P06315 115 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 LCP1P13796 627 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 KCNJ4P48050 445 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 RPS8P62241 208 aaKnown RBP5.73□□□□□ -1.49
ZNF540-204ENST00000586792 MRPS21P82921 87 aaKnown RBP5.73□□□□□ -1.49
ZNF540-204ENST00000586792 FSTL1Q12841 308 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 TOP3AQ13472 1001 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-204ENST00000586792 NFYCQ13952 458 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 GCKRQ14397 625 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 ALDH1L2Q3SY69 923 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 CD276Q5ZPR3 534 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 LAIR1Q6GTX8 287 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 TMPRSS6Q8IU80 811 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 SMC5Q8IY18 1101 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 GPC2Q8N158 579 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 CELF1Q92879 486 aaKnown RBP5.73□□□□□ -1.49
ZNF540-204ENST00000586792 DNAJC2Q99543 621 aaKnown RBP5.73□□□□□ -1.49
ZNF540-204ENST00000586792 MPHOSPH8Q99549 860 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 TACO1Q9BSH4 297 aaKnown RBP5.73□□□□□ -1.49
ZNF540-204ENST00000586792 NELFAQ9H3P2 528 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 METTL5Q9NRN9 209 aaKnown RBP5.73□□□□□ -1.49
ZNF540-204ENST00000586792 PLA2G3Q9NZ20 509 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 CEP72Q9P209 647 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 HACL1Q9UJ83 578 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 PCDHGB7Q9Y5F8 929 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 XDHP47989 1333 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 KIF16BQ96L93 1317 aa5.73□□□□□ -1.49
ZNF540-204ENST00000586792 RTL9Q8NET4 1388 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 ANKRD18BA2A2Z9 1011 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 ZNF839A8K0R7 811 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 GRM8O00222 908 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 ARHGAP6O43182 974 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 PEX14O75381 377 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 ALDH1L1O75891 902 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 UFL1O94874 794 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 IL18BPO95998 194 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 HSPA6P17066 643 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 KRT4P19013 534 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 ADRA1BP35368 520 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 MSX2P35548 267 aaPredicted RBP5.72□□□□□ -1.49
ZNF540-204ENST00000586792 KCNJ6P48051 423 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 PRELPP51888 382 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 RRADP55042 308 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 COL10A1Q03692 680 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 IFIT5Q13325 482 aaKnown RBP5.72□□□□□ -1.49
ZNF540-204ENST00000586792 TNIP1Q15025 636 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 CCDC57Q2TAC2 916 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 SDE2Q6IQ49 451 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 APBB1IPQ7Z5R6 666 aaPredicted RBP5.72□□□□□ -1.49
ZNF540-204ENST00000586792 ADGRE4PQ86SQ3 457 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 PNMA8AQ86V59 439 aaPredicted RBP5.72□□□□□ -1.49
ZNF540-204ENST00000586792 PIP4K2CQ8TBX8 421 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 SSH1Q8WYL5 1049 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 GREM2Q9H772 168 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 SLC2A4RGQ9NR83 387 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 KLHL42Q9P2K6 505 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 HDAC5Q9UQL6 1122 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 TAF1P21675 1872 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 SNED1Q8TER0 1413 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 ZNF541Q9H0D2 1346 aa5.72□□□□□ -1.49
ZNF540-204ENST00000586792 ESYT3A0FGR9 886 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 FZD9O00144 591 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 EPHX2P34913 555 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 CCT4P50991 539 aaKnown RBP5.71□□□□□ -1.5
ZNF540-204ENST00000586792 GPSM2P81274 684 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 TUSC3Q13454 348 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms