RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 PPP1R2P41236 205 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 POU5F1Q01860 360 aaKnown RBP20.91■□□□□ 0.94
DDX39A-204ENST00000586558 PAN2Q504Q3 1202 aaKnown RBP20.91■□□□□ 0.94
DDX39A-204ENST00000586558 GPR153Q6NV75 609 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 CEP120Q8N960 986 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 ACAP3Q96P50 834 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 NKX2-4Q9H2Z4 354 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 AGPAT3Q9NRZ7 376 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 MAN1B1Q9UKM7 699 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 INPP5FQ9Y2H2 1132 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 RWDD3Q9Y3V2 267 aa20.91■□□□□ 0.94
DDX39A-204ENST00000586558 LINC01553A4QN01 128 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 CARNS1A5YM72 827 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 SOX1O00570 391 aaPredicted RBP20.9■□□□□ 0.94
DDX39A-204ENST00000586558 PDXKO00764 312 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 TGFB1I1O43294 461 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 LDHAP00338 332 aaKnown RBP20.9■□□□□ 0.94
DDX39A-204ENST00000586558 MORC3Q14149 939 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 PPP2R2DQ66LE6 453 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 ARMCX5Q6P1M9 558 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 C12orf56Q8IXR9 622 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 CLP1Q92989 425 aaKnown RBP20.9■□□□□ 0.94
DDX39A-204ENST00000586558 SAMD11Q96NU1 681 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 RPS6KC1Q96S38 1066 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 GAD1Q99259 594 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 KCTD10Q9H3F6 313 aa20.9■□□□□ 0.94
DDX39A-204ENST00000586558 TYW1Q9NV66 732 aaKnown RBP20.9■□□□□ 0.94
DDX39A-204ENST00000586558 OSTNP61366 133 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 TAP1Q03518 808 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 STIM1Q13586 685 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 TMEM174Q8WUU8 243 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 SNX27Q96L92 541 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 ZFP42Q96MM3 310 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 CBWD1Q9BRT8 395 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 PLEKHA5Q9HAU0 1116 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 TBC1D13Q9NVG8 400 aa20.89■□□□□ 0.93
DDX39A-204ENST00000586558 MRPL42Q9Y6G3 142 aaKnown RBP20.89■□□□□ 0.93
DDX39A-204ENST00000586558 SLC34A2O95436 690 aa20.88■□□□□ 0.93
DDX39A-204ENST00000586558 RNASELQ05823 741 aaKnown RBP20.88■□□□□ 0.93
DDX39A-204ENST00000586558 GRIK3Q13003 919 aa20.88■□□□□ 0.93
DDX39A-204ENST00000586558 TMEM192Q8IY95 271 aa20.88■□□□□ 0.93
DDX39A-204ENST00000586558 SMYD4Q8IYR2 804 aaPredicted RBP20.88■□□□□ 0.93
DDX39A-204ENST00000586558 TGS1Q96RS0 853 aaKnown RBP20.88■□□□□ 0.93
DDX39A-204ENST00000586558 TSPAN18Q96SJ8 248 aa20.88■□□□□ 0.93
DDX39A-204ENST00000586558 KIAA1586Q9HCI6 787 aa20.88■□□□□ 0.93
DDX39A-204ENST00000586558 KLK14Q9P0G3 267 aa20.88■□□□□ 0.93
DDX39A-204ENST00000586558 CPSF3Q9UKF6 684 aaKnown RBP20.88■□□□□ 0.93
DDX39A-204ENST00000586558 LAMA3Q16787 3333 aa20.88■□□□□ 0.93
DDX39A-204ENST00000586558 BIN1O00499 593 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 EXTL3O43909 919 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 LAG3P18627 525 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 PRCPP42785 496 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 SCNN1GP51170 649 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 ERVK-21P61565 698 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 MYBPC2Q14324 1141 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 XKR4Q5GH76 650 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 ALKAL1Q6UXT8 129 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 CD302Q8IX05 232 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 ADSSL1Q8N142 457 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 GSTCDQ8NEC7 633 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 LRCH3Q96II8 777 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 RPF1Q9H9Y2 349 aaKnown RBP20.87■□□□□ 0.93
DDX39A-204ENST00000586558 AAASQ9NRG9 546 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 HSPBP1Q9NZL4 362 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 CNTN3Q9P232 1028 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 MAPK8IP1Q9UQF2 711 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 TRAF3IP3Q9Y228 551 aa20.87■□□□□ 0.93
DDX39A-204ENST00000586558 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.87■□□□□ 0.93
DDX39A-204ENST00000586558 FNDC1Q4ZHG4 1894 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-204ENST00000586558 GBF1Q92538 1859 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 TTC26A0AVF1 554 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 PSMA7O14818 248 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 CALUO43852 315 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-204ENST00000586558 ARHGEF15O94989 841 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 ADRB2P07550 413 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 CXCL8P10145 99 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 KCNE1P15382 129 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 ACOT2P49753 483 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 AFF1P51825 1210 aaKnown RBP20.86■□□□□ 0.93
DDX39A-204ENST00000586558 PPP2R3AQ06190 1150 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 ENOX2Q16206 610 aaKnown RBP20.86■□□□□ 0.93
DDX39A-204ENST00000586558 NFIL3Q16649 462 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 SLC10A6Q3KNW5 377 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 SEZ6Q53EL9 994 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 ZBTB41Q5SVQ8 909 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 CCDC183Q5T5S1 534 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 LRRC55Q6ZSA7 311 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 RBM43Q6ZSC3 357 aaKnown RBP20.86■□□□□ 0.93
DDX39A-204ENST00000586558 SLC9A9Q8IVB4 645 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 GPD1LQ8N335 351 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 SYAP1Q96A49 352 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-204ENST00000586558 FAM213AQ9BRX8 229 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 CWH43Q9H720 699 aa20.86■□□□□ 0.93
DDX39A-204ENST00000586558 PTGESO14684 152 aa20.85■□□□□ 0.93
DDX39A-204ENST00000586558 POMCP01189 267 aa20.85■□□□□ 0.93
DDX39A-204ENST00000586558 THP07101 528 aa20.85■□□□□ 0.93
DDX39A-204ENST00000586558 LINC00271P0C7V0 271 aa20.85■□□□□ 0.93
DDX39A-204ENST00000586558 BMP6P22004 513 aa20.85■□□□□ 0.93
DDX39A-204ENST00000586558 TNFSF9P41273 254 aa20.85■□□□□ 0.93
DDX39A-204ENST00000586558 DSC1Q08554 894 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms