RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 TMED10P49755 219 aaKnown RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 FCGRTP55899 365 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 BACE1P56817 501 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 MCCD1P59942 119 aaPredicted RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 CYP4A11Q02928 519 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 SPP2Q13103 211 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 RRP1BQ14684 758 aaKnown RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 UBE3CQ15386 1083 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 FAM110CQ1W6H9 321 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 ODF2Q5BJF6 829 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 IL23RQ5VWK5 629 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 BLOC1S2Q6QNY1 142 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 MARK2Q7KZI7 788 aaKnown RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 SPATA4Q8NEY3 305 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 VPS37AQ8NEZ2 397 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 C12orf42Q96LP6 360 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 TMEM237Q96Q45 408 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 PARVGQ9HBI0 331 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 DDX43Q9NXZ2 648 aaKnown RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 NKX1-2Q9UD57 310 aaPredicted RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 CPA4Q9UI42 421 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 ZBTB21Q9ULJ3 1066 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 STK38LQ9Y2H1 464 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 GIT1Q9Y2X7 761 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 PTCH2Q9Y6C5 1203 aa10.63□□□□□ -0.71
ZNF540-203ENST00000586134 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 TNRC18O15417 2968 aaPredicted RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 BAZ2AQ9UIF9 1905 aaKnown RBP10.63□□□□□ -0.71
ZNF540-203ENST00000586134 FAM196BA6NMK8 535 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 PDE2AO00408 941 aaPredicted RBP10.62□□□□□ -0.71
ZNF540-203ENST00000586134 SERPINB3P29508 390 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 KRT83P78385 493 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 GABPAQ06546 454 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 IRF5Q13568 498 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 SLC9C1Q4G0N8 1177 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 HAUS3Q68CZ6 603 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 C8orf74Q6P047 294 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 Q6ZNX1 250 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 ST13P4Q8IZP2 240 aaPredicted RBP10.62□□□□□ -0.71
ZNF540-203ENST00000586134 LSMEM2Q8N112 164 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 NUP93Q8N1F7 819 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 SPERTQ8NA61 448 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 MPP4Q96JB8 637 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 RNF14Q9UBS8 474 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 PPP1R9AQ9ULJ8 1098 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 ZMYND8Q9ULU4 1186 aaPredicted RBP10.62□□□□□ -0.71
ZNF540-203ENST00000586134 GUCA1BQ9UMX6 200 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 HEY1Q9Y5J3 304 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 USH1CQ9Y6N9 552 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 NUMBLQ9Y6R0 609 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 ZNF532Q9HCE3 1301 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 HTTP42858 3142 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 A8MUI8 341 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 TNFRSF10AO00220 468 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 MARCH6O60337 910 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 SLURP2P0DP57 97 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 TCP1P17987 556 aaKnown RBP10.62□□□□□ -0.71
ZNF540-203ENST00000586134 OSBPP22059 807 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 RPS6KB1P23443 525 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 RELAQ04206 551 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 MTMR3Q13615 1198 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 SPCS2Q15005 226 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 LINC00301Q8NCQ3 95 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 NUDCD1Q96RS6 583 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 TRPC7Q9HCX4 862 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 MORF4L1Q9UBU8 362 aa10.62□□□□□ -0.71
ZNF540-203ENST00000586134 USP17L10C9JJH3 530 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 E9PBE3 544 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 ENC1O14682 589 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 MAP3K7O43318 606 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 SRGAP2O75044 1071 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 CYP2C8P10632 490 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 RPL17P18621 184 aaKnown RBP10.61□□□□□ -0.71
ZNF540-203ENST00000586134 ARL13BQ3SXY8 428 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 KAZNQ674X7 775 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 CREG2Q8IUH2 290 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 ZBED8Q8IZ13 594 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 BBS5Q8N3I7 341 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 TMCO5AQ8N6Q1 288 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 PPFIBP2Q8ND30 876 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 FERMT2Q96AC1 680 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 ANKRD36BP1Q96IX9 119 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 EPSTI1Q96J88 318 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 C2orf49Q9BVC5 232 aaPredicted RBP10.61□□□□□ -0.71
ZNF540-203ENST00000586134 ARHGAP39Q9C0H5 1083 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 NDEL1Q9GZM8 345 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 RXFP1Q9HBX9 757 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 TXLNGQ9NUQ3 528 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 NMRK1Q9NWW6 199 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 SNX12Q9UMY4 172 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 HBS1LQ9Y450 684 aaKnown RBP10.61□□□□□ -0.71
ZNF540-203ENST00000586134 NFE2L3Q9Y4A8 694 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 EPN1Q9Y6I3 576 aaPredicted RBP10.61□□□□□ -0.71
ZNF540-203ENST00000586134 NDUFB9Q9Y6M9 179 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
ZNF540-203ENST00000586134 FAM237AA0A1B0GTK4 181 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms