RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 FOXB2Q5VYV0 432 aa2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 ARMC6Q6NXE6 501 aa2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 BRAPQ7Z569 592 aa2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 TICAM2Q86XR7 235 aa2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 VPS37AQ8NEZ2 397 aa2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 SLC6A20Q9NP91 592 aa2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 APOBEC2Q9Y235 224 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 VWA7Q9Y334 891 aa2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 CD163L1Q9NR16 1453 aa2.31□□□□□ -2.04
SMCHD1-211ENST00000584897 SHTN1A0MZ66 631 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 RECQL4O94761 1208 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 SCG5P05408 212 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 SRGAP2CP0DJJ0 459 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ZNF20P17024 532 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 AVPR1BP47901 424 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 INHBCP55103 352 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 GALEQ14376 348 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ZYXQ15942 572 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PLEKHO1Q53GL0 409 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 TSHZ1Q6ZSZ6 1077 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 Q6ZUG5 572 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 IGDCC4Q8TDY8 1250 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 CLUHP3Q96NS8 147 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PCIF1Q9H4Z3 704 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PPCSQ9HAB8 311 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 NCOA5Q9HCD5 579 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 CATSPERZQ9NTU4 200 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ASH2LQ9UBL3 628 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 SAP30BPQ9UHR5 308 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ATP23Q9Y6H3 246 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PCDH11XQ9BZA7 1347 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PCDH11YQ9BZA8 1340 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 RIC1Q4ADV7 1423 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 C7orf72A4D263 438 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 FFAR3O14843 346 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 VAMP4O75379 141 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 NTRK1P04629 796 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PABPC1P11940 636 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ZSCAN20P17040 1043 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 CAPN2P17655 700 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 SNW1Q13573 536 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 INAVAQ3KP66 663 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 TIGD5Q53EQ6 642 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 STRIP1Q5VSL9 837 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 HHIPL2Q6UWX4 724 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ZPBP2Q6X784 338 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 C14orf80Q86SX3 495 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 KBTBD2Q8IY47 623 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 BTN2A2Q8WVV5 523 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 CLIP3Q96DZ5 547 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 HOOK2Q96ED9 719 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 LTV1Q96GA3 475 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 AJUBAQ96IF1 538 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PUS7LQ9H0K6 701 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 THG1LQ9NWX6 298 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 GULP1Q9UBP9 304 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 GIT1Q9Y2X7 761 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 DUOX1Q9NRD9 1551 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ACEP12821 1306 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 A0A1W2PP64 1363 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 MRC1P22897 1456 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 WASH4PA8MWX3 477 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ERVV-2B6SEH9 535 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 CCER2I3L3R5 266 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 NRP2O60462 931 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ASLP04424 464 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 CDK4P11802 303 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 VCAM1P19320 739 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PTGS2P35354 604 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 BCL6P41182 706 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 RAB27AP51159 221 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 NCKAP1LP55160 1127 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PAK1Q13153 545 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 TCIRG1Q13488 830 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 C1orf228Q6PIY5 440 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 APBB1IPQ7Z5R6 666 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ZNF761Q86XN6 746 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ZZZ3Q8IYH5 903 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 GSTCDQ8NEC7 633 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 SSH1Q8WYL5 1049 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 SLC9A6Q92581 669 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 CHMP4CQ96CF2 233 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 CDIP1Q9H305 208 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ZHX3Q9H4I2 956 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 PRDM11Q9NQV5 511 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 USP25Q9UHP3 1055 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 ADAM29Q9UKF5 820 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 NOC2LQ9Y3T9 749 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 IL16Q14005 1332 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 KDRP35968 1356 aa2.3□□□□□ -2.04
SMCHD1-211ENST00000584897 IFNGR1P15260 489 aa2.29□□□□□ -2.04
SMCHD1-211ENST00000584897 NRG3P56975 720 aa2.29□□□□□ -2.04
SMCHD1-211ENST00000584897 SMAD3P84022 425 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-211ENST00000584897 STAT4Q14765 748 aa2.29□□□□□ -2.04
SMCHD1-211ENST00000584897 SKOR2Q2VWA4 1001 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-211ENST00000584897 ATP13A4Q4VNC1 1196 aa2.29□□□□□ -2.04
SMCHD1-211ENST00000584897 CDCA2Q69YH5 1023 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-211ENST00000584897 MCTP2Q6DN12 878 aa2.29□□□□□ -2.04
SMCHD1-211ENST00000584897 ARHGEF25Q86VW2 580 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms