RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 SCNM1Q9BWG6 230 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 LSM14BQ9BX40 385 aaKnown RBP7.08□□□□□ -1.28
CTC1-212ENST00000584439 OSBPL3Q9H4L5 887 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 ATP6V0A4Q9HBG4 840 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 VAT1LQ9HCJ6 419 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 WDR6Q9NNW5 1121 aaKnown RBP7.08□□□□□ -1.28
CTC1-212ENST00000584439 TMEM161AQ9NX61 479 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 STIM2Q9P246 746 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 ZNF215Q9UL58 517 aaPredicted RBP7.08□□□□□ -1.28
CTC1-212ENST00000584439 RAB23Q9ULC3 237 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 ST3GAL5Q9UNP4 418 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 GINS2Q9Y248 185 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 SQORQ9Y6N5 450 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 CACNA1EQ15878 2313 aa7.08□□□□□ -1.28
CTC1-212ENST00000584439 CEP192Q8TEP8 1941 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 MYO16Q9Y6X6 1858 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 SPATA31C2B4DYI2 1134 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 ZBTB39O15060 712 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 MAFGO15525 162 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 B4GALT3O60512 393 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 ATP9AO75110 1047 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 CNPP09543 421 aaKnown RBP7.07□□□□□ -1.28
CTC1-212ENST00000584439 SPATA31D3P0C874 917 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 CTSAP10619 480 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 JUNDP17535 347 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 PPM1AP35813 382 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 ETFBP38117 255 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 GYS2P54840 703 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 USP4Q13107 963 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 SIM2Q14190 667 aaPredicted RBP7.07□□□□□ -1.28
CTC1-212ENST00000584439 PLCB4Q15147 1175 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 NONOQ15233 471 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTC1-212ENST00000584439 COL28A1Q2UY09 1125 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 AASDHQ4L235 1098 aaPredicted RBP7.07□□□□□ -1.28
CTC1-212ENST00000584439 C4orf46Q504U0 113 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 SPATA31D4Q6ZUB0 917 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 GET4Q7L5D6 327 aaPredicted RBP7.07□□□□□ -1.28
CTC1-212ENST00000584439 FERMT3Q86UX7 667 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 FCHSD1Q86WN1 690 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 RAVER1Q8IY67 606 aaKnown RBP7.07□□□□□ -1.28
CTC1-212ENST00000584439 CELF5Q8N6W0 485 aaKnown RBP7.07□□□□□ -1.28
CTC1-212ENST00000584439 ZNF707Q96C28 371 aaPredicted RBP7.07□□□□□ -1.28
CTC1-212ENST00000584439 KLHL5Q96PQ7 755 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 DEPDC7Q96QD5 511 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 PCYT2Q99447 389 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 TMEM117Q9H0C3 514 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 MAN1C1Q9NR34 630 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 TCP11L1Q9NUJ3 509 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 SEPT9Q9UHD8 586 aaPredicted RBP7.07□□□□□ -1.28
CTC1-212ENST00000584439 PNMA2Q9UL42 364 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 POLIQ9UNA4 740 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 PCDHB11Q9Y5F2 797 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 IRAK3Q9Y616 596 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 ATMQ13315 3056 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 ACACAQ13085 2346 aa7.07□□□□□ -1.28
CTC1-212ENST00000584439 KDM3AQ9Y4C1 1321 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 TEP1Q99973 2627 aaKnown RBP7.06□□□□□ -1.28
CTC1-212ENST00000584439 TMEM8BA6NDV4 472 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 CHURC1-FNTBB4DL54 471 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 AXIN1O15169 862 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 INPPL1O15357 1258 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 RPS6KA5O75582 802 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 CAPNS1P04632 268 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 SLC3A2P08195 630 aaKnown RBP7.06□□□□□ -1.28
CTC1-212ENST00000584439 GSPT1P15170 499 aaKnown RBP7.06□□□□□ -1.28
CTC1-212ENST00000584439 SDSP20132 328 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 CCND2P30279 289 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 FNTBP49356 437 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 LIMK1P53667 647 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 KRT76Q01546 638 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 GHRHRQ02643 423 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 ZNF252P-AS1Q0IIN9 211 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 RRP12Q5JTH9 1297 aaKnown RBP7.06□□□□□ -1.28
CTC1-212ENST00000584439 COX20Q5RI15 118 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 ZBTB41Q5SVQ8 909 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 MEI1Q5TIA1 1274 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 LARP1BQ659C4 914 aaKnown RBP7.06□□□□□ -1.28
CTC1-212ENST00000584439 KIAA1211LQ6NV74 962 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 C15orf39Q6ZRI6 1047 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.06□□□□□ -1.28
CTC1-212ENST00000584439 FAM228AQ86W67 206 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 ZNF687Q8N1G0 1237 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 FAM160A2Q8N612 972 aaPredicted RBP7.06□□□□□ -1.28
CTC1-212ENST00000584439 FBF1Q8TES7 1133 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 SHDQ96IW2 340 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 ZKSCAN3Q9BRR0 538 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 TRIM55Q9BYV6 548 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 ARRDC1-AS1Q9H2J1 176 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 JMJD4Q9H9V9 463 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 C1orf112Q9NSG2 853 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 MRPL11Q9Y3B7 192 aaKnown RBP7.06□□□□□ -1.28
CTC1-212ENST00000584439 PCDHA1Q9Y5I3 950 aa7.06□□□□□ -1.28
CTC1-212ENST00000584439 TEX15Q9BXT5 2789 aa7.05□□□□□ -1.28
CTC1-212ENST00000584439 ESYT3A0FGR9 886 aa7.05□□□□□ -1.28
CTC1-212ENST00000584439 HMGB1P1B2RPK0 211 aaPredicted RBP7.05□□□□□ -1.28
CTC1-212ENST00000584439 M0QZ92 97 aa7.05□□□□□ -1.28
CTC1-212ENST00000584439 KLF4O43474 513 aa7.05□□□□□ -1.28
CTC1-212ENST00000584439 RNF40O75150 1001 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms