RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 USP20Q9Y2K6 914 aa5.95□□□□□ -1.46
CRLF3-204ENST00000583527 COQ4Q9Y3A0 265 aa5.95□□□□□ -1.46
CRLF3-204ENST00000583527 JRKLQ9Y4A0 524 aa5.95□□□□□ -1.46
CRLF3-204ENST00000583527 SAR1BQ9Y6B6 198 aa5.95□□□□□ -1.46
CRLF3-204ENST00000583527 STYXL1Q9Y6J8 313 aa5.95□□□□□ -1.46
CRLF3-204ENST00000583527 TSC2P49815 1807 aa5.95□□□□□ -1.46
CRLF3-204ENST00000583527 A0A0A6YYK5 440 aaPredicted RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 A0A0B4J269 797 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 IGKV6-21A0A0C4DH24 114 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 RBM47A0AV96 593 aaKnown RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ZNF233A6NK53 670 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 PDE2AO00408 941 aaPredicted RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ABLIM1O14639 778 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 SRGAP2O75044 1071 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 PALMO75781 387 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 HLA-DRAP01903 254 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 GJB1P08034 283 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 TMEM253P0C7T8 217 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 CCDC172P0C7W6 258 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 HOXD8P13378 290 aaPredicted RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 TCP1P17987 556 aaKnown RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ADCYAP1R1P41586 468 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 MATR3P43243 847 aaKnown RBP eCLIP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 PDE6CP51160 858 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 DNA2P51530 1060 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 EFNA5P52803 228 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 HUNKP57058 714 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 MCCD1P59942 119 aaPredicted RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 NOP14P78316 857 aaKnown RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 MBTD1Q05BQ5 628 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 LAMTOR4Q0VGL1 99 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 BIRC3Q13489 604 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ZNF568Q3ZCX4 644 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ZACNQ401N2 412 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 C10orf76Q5T2E6 689 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 TDRD10Q5VZ19 366 aaKnown RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 TAPT1Q6NXT6 567 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 C15orf39Q6ZRI6 1047 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 SV2AQ7L0J3 742 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ZNF572Q7Z3I7 529 aaPredicted RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 PLEKHH3Q7Z736 793 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 DNAAF5Q86Y56 855 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 RNF10Q8N5U6 811 aaKnown RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 GPR161Q8N6U8 529 aaKnown RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 C2orf69Q8N8R5 385 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 LRRC57Q8N9N7 239 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 RNF149Q8NC42 400 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 MSANTD4Q8NCY6 345 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 FBXL13Q8NEE6 735 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 PPTC7Q8NI37 304 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 HELQQ8TDG4 1101 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 COG1Q8WTW3 980 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 AFG1LQ8WV93 481 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 DHX38Q92620 1227 aaKnown RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 VTI1AQ96AJ9 217 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ZBTB10Q96DT7 871 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 MAML3Q96JK9 1138 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 NLRP4Q96MN2 994 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 OSBPL9Q96SU4 736 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 PNKPQ96T60 521 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 MMS19Q96T76 1030 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 PSMB7Q99436 277 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 JPH2Q9BR39 696 aaPredicted RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 TLR10Q9BXR5 811 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 GOLPH3Q9H4A6 298 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 SMARCAD1Q9H4L7 1026 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 TMEM134Q9H6X4 195 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ANKZF1Q9H8Y5 726 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 KIAA1586Q9HCI6 787 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 UBE2TQ9NPD8 197 aaPredicted RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 NMRK2Q9NPI5 230 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 NRBP2Q9NSY0 501 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 SEPT11Q9NVA2 429 aaKnown RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ZNF446Q9NWS9 450 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ERAP1Q9NZ08 941 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 SMARCAL1Q9NZC9 954 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 EHD2Q9NZN4 543 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 ZHX1Q9UKY1 873 aaPredicted RBP5.94□□□□□ -1.46
CRLF3-204ENST00000583527 INTUQ9ULD6 942 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 SCN1AP35498 2009 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 CNTNAP2Q9UHC6 1331 aa5.94□□□□□ -1.46
CRLF3-204ENST00000583527 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.93□□□□□ -1.46
CRLF3-204ENST00000583527 FAM170AA1A519 330 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 IGF2BP3O00425 579 aaKnown RBP eCLIP5.93□□□□□ -1.46
CRLF3-204ENST00000583527 ZNF185O15231 689 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 B4GALT5O43286 388 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 ADCY6O43306 1168 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 HBP1O60381 514 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 MSCO60682 206 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 ZC3H11AO75152 810 aaKnown RBP eCLIP5.93□□□□□ -1.46
CRLF3-204ENST00000583527 CLSTN1O94985 981 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 MMP3P08254 477 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 CLTAP09496 248 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 KRT5P13647 590 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 MAPK4P31152 587 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 PHKA2P46019 1235 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 ACOT2P49753 483 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 NAP1L1P55209 391 aaKnown RBP5.93□□□□□ -1.46
CRLF3-204ENST00000583527 IGBP1P78318 339 aa5.93□□□□□ -1.46
CRLF3-204ENST00000583527 CLDN10P78369 228 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms