RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FAM214AQ32MH5 1076 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 UBXN11Q5T124 520 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 GJC2Q5T442 439 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 ZGPATQ8N5A5 531 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 ZBTB34Q8NCN2 500 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 GIMAP8Q8ND71 665 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 ARL8AQ96BM9 186 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 RUNDC1Q96C34 613 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 TMX3Q96JJ7 454 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 TCF25Q9BQ70 676 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 PLA2G12BQ9BX93 195 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 MEGF9Q9H1U4 602 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 LANCL2Q9NS86 450 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 GABBR1Q9UBS5 961 aa7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 AJAP1Q9UKB5 411 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-219ENST00000583294 LRRC14BA6NHZ5 514 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 KIF3BO15066 747 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 AMY1AP04745 511 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 ALDH2P05091 517 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 CDC42EP1Q00587 391 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 GRM3Q14832 879 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 TTC7BQ86TV6 843 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 C1GALT1C1Q96EU7 318 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 IL17RAQ96F46 866 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 OR14A2Q96R54 314 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 ENKD1Q9H0I2 346 aa7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 MYBBP1AQ9BQG0 1328 aaKnown RBP7.18□□□□□ -1.26
SMARCE1-219ENST00000583294 NPEPPSL1A6NEC2 478 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 ERC2O15083 957 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 PRC1O43663 620 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 PRICKLE3O43900 615 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 RPLP2P05387 115 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 FPR1P21462 350 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 GZMKP49863 264 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 TBC1D10BQ4KMP7 808 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 CCDC157Q569K6 752 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 MFSD14BQ5SR56 506 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 SLFN13Q68D06 897 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 FAM111BQ6SJ93 734 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 SLC4A10Q6U841 1118 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 PDZD4Q76G19 769 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 FRMD5Q7Z6J6 570 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 RGMAQ96B86 450 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 TIFAQ96CG3 184 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 CEP95Q96GE4 821 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 VRK1Q99986 396 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 TMEM140Q9NV12 185 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 GEMIN8Q9NWZ8 242 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 PPP4R1LQ9P1A2 415 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 RUVBL1Q9Y265 456 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 ACTL7AQ9Y615 435 aa7.17□□□□□ -1.26
SMARCE1-219ENST00000583294 PMS2P1A4D2B8 440 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 GPR32O75388 356 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 FTLP02792 175 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 DDCP20711 480 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 PCSK1P29120 753 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 MAP2K6P52564 334 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 TBX4P57082 545 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 MRPL49Q13405 166 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 KHDC1Q4VXA5 237 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 LIMS2Q7Z4I7 341 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 NSUN6Q8TEA1 469 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 CYFIP2Q96F07 1278 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 TEPSINQ96N21 525 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 CGRRF1Q99675 332 aa7.16□□□□□ -1.26
SMARCE1-219ENST00000583294 HOXA3O43365 443 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 SGTAO43765 313 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 RAP2AP10114 183 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 GUCY1A2P33402 732 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 GNALP38405 381 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 GRM7Q14831 915 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 LLGL1Q15334 1064 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 GADL1Q6ZQY3 521 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 PRRT2Q7Z6L0 340 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 DGKHQ86XP1 1220 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 DENND1CQ8IV53 801 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 DMRTA2Q96SC8 542 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 NELFAQ9H3P2 528 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 KMT5AQ9NQR1 393 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 PRDM11Q9NQV5 511 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 C1orf112Q9NSG2 853 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 PCDHA3Q9Y5H8 950 aa7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 FRMPD2Q68DX3 1309 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1-219ENST00000583294 UBXN7O94888 489 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 PLATP00750 562 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 IL2RBP14784 551 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 ALOX15P16050 662 aaPredicted RBP7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 RPS19P39019 145 aaKnown RBP7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 ALDH1A3P47895 512 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 ZNF280AP59817 542 aaPredicted RBP7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 KRTAP10-2P60368 255 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 DUSP8Q13202 625 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 MTM1Q13496 603 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 FKBP15Q5T1M5 1219 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 AFMIDQ63HM1 303 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 TCTN3Q6NUS6 607 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 OVCH2Q7RTZ1 564 aa7.14□□□□□ -1.27
SMARCE1-219ENST00000583294 ZNF572Q7Z3I7 529 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms