RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PCDHGA1	Q9Y5H4	931 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	MYH7	P12883	1935 aa		5.84	□□□□□ -1.48
MSI2-216	ENST00000582772		M0QZ92	97 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	SOD2	P04179	222 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	UROD	P06132	367 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	GALT	P07902	379 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	HSPA5	P11021	654 aa	Known RBP	5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	ZAP70	P43403	619 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	CDK8	P49336	464 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	NAA30	Q147X3	362 aa	Predicted RBP	5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	STXBP2	Q15833	593 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	ARL13B	Q3SXY8	428 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	MARCH8	Q5T0T0	291 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	FHL5	Q5TD97	284 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	KCNV1	Q6PIU1	500 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	DHRS13	Q6UX07	377 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	TIPARP	Q7Z3E1	657 aa	Known RBP	5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	ATCAY	Q86WG3	371 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	MIGA1	Q8NAN2	632 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	RGS22	Q8NE09	1264 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	DYNLL2	Q96FJ2	89 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	CNOT6L	Q96LI5	555 aa	Known RBP	5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	SGPP1	Q9BX95	441 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	CELF4	Q9BZC1	486 aa	Known RBP	5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	TRPV4	Q9HBA0	871 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	CHST12	Q9NRB3	414 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	ZNF215	Q9UL58	517 aa	Predicted RBP	5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	ZNF281	Q9Y2X9	895 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	MRVI1	Q9Y6F6	885 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	ANK1	P16157	1881 aa		5.83	□□□□□ -1.48
MSI2-216	ENST00000582772	MEGF8	Q7Z7M0	2845 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	ATXN2	Q99700	1313 aa	Known RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	NUP210	Q8TEM1	1887 aa	Predicted RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	IGKV6D-41	A0A0C4DH26	115 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	TMEM232	C9JQI7	657 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	ZNF263	O14978	683 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	CHAD	O15335	359 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	HNRNPR	O43390	633 aa	Known RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	GAS2	O43903	313 aa	Known RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	EIF3J	O75822	258 aa	Known RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	UQCRFS1P1	P0C7P4	283 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	TGFB3	P10600	412 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	JUP	P14923	745 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	ITGB5	P18084	799 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	CYP7A1	P22680	504 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	ITPKA	P23677	461 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	ERVPABLB-1	P60509	514 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	SKOR1	P84550	965 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	FCHO2	Q0JRZ9	810 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	PON2	Q15165	354 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	ZNF598	Q86UK7	904 aa	Known RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	MFSD6L	Q8IWD5	586 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	CSGALNACT1	Q8TDX6	532 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	GMCL1	Q96IK5	515 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	ASB16	Q96NS5	453 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	FNBP1	Q96RU3	617 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	HERC2P3	Q9BVR0	1158 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	AMN	Q9BXJ7	453 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	SRCIN1	Q9C0H9	1055 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	RANBP17	Q9H2T7	1088 aa	Known RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	FNIP2	Q9P278	1114 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	FBXW11	Q9UKB1	542 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	PHTF1	Q9UMS5	762 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	AKAP2	Q9Y2D5	859 aa		5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	BAZ2B	Q9UIF8	2168 aa	Known RBP	5.82	□□□□□ -1.48
MSI2-216	ENST00000582772	UBE4B	O95155	1302 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772		A0A1W2PQD8	194 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	SLC38A8	A6NNN8	435 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772		B4E1Z4	1266 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	KLK10	O43240	276 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	XYLB	O75191	536 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	MICAL2	O94851	1124 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	GGPS1	O95749	300 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	SPATA31D3	P0C874	917 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	UBA1	P22314	1058 aa	Known RBP	5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	P2RY2	P41231	377 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	SOX9	P48436	509 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	DGKE	P52429	567 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	AK2	P54819	239 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	CALD1	Q05682	793 aa	Known RBP	5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	NFX1	Q12986	1120 aa	Known RBP	5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	TARDBP	Q13148	414 aa	Known RBP eCLIP	5.81	□□□□□ -1.48	8e-7	■■■■■ 27.7
MSI2-216	ENST00000582772	TMEM266	Q2M3C6	531 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	PABPC1L	Q4VXU2	614 aa	Known RBP	5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	TMEM196	Q5HYL7	178 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	SPATA31D4	Q6ZUB0	917 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	SETD7	Q8WTS6	366 aa	Known RBP	5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	OSBP2	Q969R2	916 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	PNMA2	Q9UL42	364 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	PLAA	Q9Y263	795 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	TLN2	Q9Y4G6	2542 aa		5.81	□□□□□ -1.48
MSI2-216	ENST00000582772	NCAN	O14594	1321 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	TMEM200C	A6NKL6	621 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms