RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 HSPBAP1Q96EW2 488 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 CYFIP2Q96F07 1278 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 TMEM140Q9NV12 185 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 SERPINB13Q9UIV8 391 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 THRAP3Q9Y2W1 955 aaKnown RBP6□□□□□ -1.45
SMCHD1-204ENST00000581226 GIT1Q9Y2X7 761 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 IPPQ9Y573 584 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 PCDHA13Q9Y5I0 950 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 E2F8A0AVK6 867 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 AKAP10O43572 662 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 IL2RBP14784 551 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 ZSCAN20P17040 1043 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 EDNRBP24530 442 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 FLT3LGP49771 235 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 PIN1Q13526 163 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 C3orf36Q3SXR2 165 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 ANKS6Q68DC2 871 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 ZNF572Q7Z3I7 529 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 MDGA1Q8NFP4 955 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 LSM14BQ9BX40 385 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 C1QTNF3Q9BXJ4 246 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 KRTAP3-1Q9BYR8 98 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 SPON1Q9HCB6 807 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 TCF7L1Q9HCS4 588 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 TDP1Q9NUW8 608 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 MOCS1Q9NZB8 636 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 ZNF180Q9UJW8 692 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 AJAP1Q9UKB5 411 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 ANKRD6Q9Y2G4 727 aa5.99□□□□□ -1.45
SMCHD1-204ENST00000581226 PRR5-ARHGAP8B1AHC4 643 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 B5MCH6 92 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 ABLIM3O94929 683 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 PF4V1P10720 104 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 HK1P19367 917 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 GUCY1A2P33402 732 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 PTH1RQ03431 593 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 CRHR2Q13324 411 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 SP140Q13342 867 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 IL10RAQ13651 578 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 R3HDM1Q15032 1099 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 DOK3Q7L591 496 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 RAVER1Q8IY67 606 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 JDP2Q8WYK2 163 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 PGBD4Q96DM1 585 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 PUS7Q96PZ0 661 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 GPR20Q99678 358 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 GPR87Q9BY21 358 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 ZIM2Q9NZV7 527 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 G3BP2Q9UN86 482 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 TSC22D4Q9Y3Q8 395 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 TESMINQ9Y4I5 508 aa5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 MYBBP1AQ9BQG0 1328 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-204ENST00000581226 ATRNL1Q5VV63 1379 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 TBKBP1A7MCY6 615 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 WNT10BO00744 389 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 RAP2AP10114 183 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 ALOX15P16050 662 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 VCAM1P19320 739 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 MAN2A2P49641 1150 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 SCNN1GP51170 649 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 CNGB1Q14028 1251 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 CDSNQ15517 529 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 AFMIDQ63HM1 303 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 Q6ZRM9 215 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 RSPH3Q86UC2 560 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 SLC35B2Q8TB61 432 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 JPH3Q8WXH2 748 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 KAT5Q92993 513 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 RAB24Q969Q5 203 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 RHOBTB2Q9BYZ6 727 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 CPEB1Q9BZB8 566 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 KCNH6Q9H252 994 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 CLCA2Q9UQC9 943 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 ACTL7AQ9Y615 435 aa5.97□□□□□ -1.45
SMCHD1-204ENST00000581226 CXorf49A8MYA2 514 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 GPR32O75388 356 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 AMY1AP04745 511 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 RPLP2P05387 115 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 DDCP20711 480 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 PDCP20941 246 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 FPR1P21462 350 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 ACRV1P26436 265 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 PCSK1P29120 753 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 RABGGTBP53611 331 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 RRP1BQ14684 758 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 BMT2Q1RMZ1 405 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 DCAF17Q5H9S7 520 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 METTL24Q5JXM2 366 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 SPDYAQ5MJ70 313 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 PPP4R3AQ6IN85 833 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 GPRIN1Q7Z2K8 1008 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 ZGPATQ8N5A5 531 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 OR52N2Q8NGI0 321 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 CASKIN2Q8WXE0 1202 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 TFAP2CQ92754 450 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 NUP88Q99567 741 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 MNTQ99583 582 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 MRI1Q9BV20 369 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 RTFDC1Q9BY42 306 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 POGKQ9P215 609 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms