RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 SEZ6Q53EL9 994 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 CENPPQ6IPU0 288 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 ARMCX5Q6P1M9 558 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 CRELD2Q6UXH1 353 aaPredicted RBP16.48■□□□□ 0.23
MKS1-210ENST00000581180 HS2ST1Q7LGA3 356 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 GSTCDQ8NEC7 633 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 SP7Q8TDD2 431 aaPredicted RBP16.48■□□□□ 0.23
MKS1-210ENST00000581180 HELQQ8TDG4 1101 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 CASD1Q96PB1 797 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 RAD9AQ99638 391 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
MKS1-210ENST00000581180 TMEM117Q9H0C3 514 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 UBN1Q9NPG3 1134 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 CPSF3Q9UKF6 684 aaKnown RBP16.48■□□□□ 0.23
MKS1-210ENST00000581180 INSL6Q9Y581 213 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 KIAA0391O15091 583 aaKnown RBP16.47■□□□□ 0.23
MKS1-210ENST00000581180 TLL1O43897 1013 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 CLTAP09496 248 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 PPP1R2P41236 205 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 TNFSF9P41273 254 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 AFF1P51825 1210 aaKnown RBP16.47■□□□□ 0.23
MKS1-210ENST00000581180 OSTNP61366 133 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 NFIL3Q16649 462 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 XKR4Q5GH76 650 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 ALKAL1Q6UXT8 129 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 SLC9A9Q8IVB4 645 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 CMTR2Q8IYT2 770 aaKnown RBP16.47■□□□□ 0.23
MKS1-210ENST00000581180 GOLGA5Q8TBA6 731 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
MKS1-210ENST00000581180 DHTKD1Q96HY7 919 aaPredicted RBP16.47■□□□□ 0.23
MKS1-210ENST00000581180 FBXL18Q96ME1 805 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 ACAP3Q96P50 834 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 GAD1Q99259 594 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 ZBED2Q9BTP6 218 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 PBX4Q9BYU1 374 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 CXCL16Q9H2A7 254 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 PCIF1Q9H4Z3 704 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 MIOSQ9NXC5 875 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 HSPBP1Q9NZL4 362 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 PARP2Q9UGN5 583 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 PCDHA11Q9Y5I1 949 aa16.47■□□□□ 0.23
MKS1-210ENST00000581180 LCHNA4D1U4 455 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 ARL5CA6NH57 179 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 TBKBP1A7MCY6 615 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 LDHAP00338 332 aaKnown RBP16.46■□□□□ 0.23
MKS1-210ENST00000581180 ADRB2P07550 413 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 MYOGP15173 224 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 CCNE1P24864 410 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 PBX2P40425 430 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 MLH1P40692 756 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 ACOT2P49753 483 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 PMS1P54277 932 aaKnown RBP16.46■□□□□ 0.23
MKS1-210ENST00000581180 NLRP12P59046 1061 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 SMAD3P84022 425 aaKnown RBP16.46■□□□□ 0.23
MKS1-210ENST00000581180 POU5F1Q01860 360 aaKnown RBP16.46■□□□□ 0.23
MKS1-210ENST00000581180 STIM1Q13586 685 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 MYBPC2Q14324 1141 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 SLC10A6Q3KNW5 377 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 GLB1LQ6UWU2 654 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 RSPH1Q8WYR4 309 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 SAAL1Q96ER3 474 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 SNX27Q96L92 541 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 ZFP42Q96MM3 310 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 YME1L1Q96TA2 773 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 KLK14Q9P0G3 267 aa16.46■□□□□ 0.23
MKS1-210ENST00000581180 YBX2Q9Y2T7 364 aaKnown RBP16.46■□□□□ 0.23
MKS1-210ENST00000581180 TTC26A0AVF1 554 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 PTGESO14684 152 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 PSMA7O14818 248 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 CALUO43852 315 aaPredicted RBP16.45■□□□□ 0.22
MKS1-210ENST00000581180 EXTL3O43909 919 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 NR3C1P04150 777 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 LINC00271P0C7V0 271 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 CXCL8P10145 99 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 ENOX2Q16206 610 aaKnown RBP16.45■□□□□ 0.22
MKS1-210ENST00000581180 EDRF1Q3B7T1 1238 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 NOMO2Q5JPE7 1267 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 LRRC55Q6ZSA7 311 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 ABI1Q8IZP0 508 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 GPD1LQ8N335 351 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 MLKLQ8NB16 471 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 P2RX5Q93086 422 aa16.45■□□□□ 0.22
MKS1-210ENST00000581180 GOLGA8IPA6NC78 632 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 TRIM49BA6NDI0 452 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 GOLGA8JA6NMD2 632 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 ARHGEF15O94989 841 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 CYP2J2P51589 502 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 YARSP54577 528 aaKnown RBP16.44■□□□□ 0.22
MKS1-210ENST00000581180 BTG3Q14201 252 aaPredicted RBP16.44■□□□□ 0.22
MKS1-210ENST00000581180 RAB30Q15771 203 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 DPCR1Q3MIW9 517 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 PAN2Q504Q3 1202 aaKnown RBP16.44■□□□□ 0.22
MKS1-210ENST00000581180 ANKRD40Q6AI12 368 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 KLHL10Q6JEL2 608 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 FOXR2Q6PJQ5 311 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 BRSK2Q8IWQ3 736 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 ZC3H3Q8IXZ2 948 aaKnown RBP16.44■□□□□ 0.22
MKS1-210ENST00000581180 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 NELFBQ8WX92 580 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms