RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 AFMP43652 599 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 ERVFC1P60507 584 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 PLCB3Q01970 1234 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 DPYDQ12882 1025 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 COASYQ13057 564 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 ADAM15Q13444 863 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 CUL4BQ13620 913 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 KCNB1Q14721 858 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 POSTNQ15063 836 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 HERC4Q5GLZ8 1057 aaPredicted RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 SLC27A1Q6PCB7 646 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 ZPBP2Q6X784 338 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 STXBP4Q6ZWJ1 553 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 APBB1IPQ7Z5R6 666 aaPredicted RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 ADGRD2Q7Z7M1 963 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 MAP4K3Q8IVH8 894 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 LPPQ93052 612 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 KIFC3Q9BVG8 833 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 MRPL9Q9BYD2 267 aaKnown RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 MRPL4Q9BYD3 311 aaKnown RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 GTPBP4Q9BZE4 634 aaKnown RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 MRPL44Q9H9J2 332 aaKnown RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 TLR9Q9NR96 1032 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 LMBRD1Q9NUN5 540 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 PUF60Q9UHX1 559 aaKnown RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 LZTS1Q9Y250 596 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 TNFSF13BQ9Y275 285 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 PCDHB2Q9Y5E7 798 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 PCDHGC5Q9Y5F6 944 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 ANK1P16157 1881 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 NCOR1O75376 2440 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 MEIS3P2A8K0S8 358 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 LINC01565O15544 149 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 OFD1O75665 1012 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 IL9P15248 144 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 PROZP22891 400 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 PPM1AP35813 382 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 PBX3P40426 434 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 NRIP1P48552 1158 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 KRT17Q04695 432 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 DLX2Q07687 328 aaPredicted RBP10.83□□□□□ -0.68
GGA3-209ENST00000580646 DCAF4L1Q3SXM0 396 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 NOMO2Q5JPE7 1267 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 FAM26FQ5R3K3 315 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 UBXN11Q5T124 520 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 PDE12Q6L8Q7 609 aaKnown RBP10.83□□□□□ -0.68
GGA3-209ENST00000580646 GLB1LQ6UWU2 654 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 EPM2AIP1Q7L775 607 aaPredicted RBP10.83□□□□□ -0.68
GGA3-209ENST00000580646 MRPL10Q7Z7H8 261 aaKnown RBP10.83□□□□□ -0.68
GGA3-209ENST00000580646 RBM23Q86U06 439 aaKnown RBP10.83□□□□□ -0.68
GGA3-209ENST00000580646 SPATA20Q8TB22 786 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 CCDC47Q96A33 483 aaKnown RBP10.83□□□□□ -0.68
GGA3-209ENST00000580646 PGBD4Q96DM1 585 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 ACO2Q99798 780 aaKnown RBP10.83□□□□□ -0.68
GGA3-209ENST00000580646 ADPGKQ9BRR6 497 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 BLZF1Q9H2G9 400 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 ZHX3Q9H4I2 956 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 TLE6Q9H808 572 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 PTPRHQ9HD43 1115 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 SPG21Q9NZD8 308 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 TBX20Q9UMR3 447 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 FAM50BQ9Y247 325 aa10.83□□□□□ -0.68
GGA3-209ENST00000580646 TCF20Q9UGU0 1960 aaKnown RBP10.83□□□□□ -0.68
GGA3-209ENST00000580646 FSCN2O14926 492 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 B4GALT5O43286 388 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 TOM1L1O75674 476 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 RHOBTB3O94955 611 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 RPN1P04843 607 aaKnown RBP10.82□□□□□ -0.68
GGA3-209ENST00000580646 EDN1P05305 212 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 NMT1P30419 496 aaKnown RBP10.82□□□□□ -0.68
GGA3-209ENST00000580646 ALDH7A1P49419 539 aaKnown RBP10.82□□□□□ -0.68
GGA3-209ENST00000580646 BCAR1P56945 870 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 SNRPFP62306 86 aaKnown RBP10.82□□□□□ -0.68
GGA3-209ENST00000580646 BMT2Q1RMZ1 405 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 L1TD1Q5T7N2 865 aaKnown RBP10.82□□□□□ -0.68
GGA3-209ENST00000580646 NT5DC1Q5TFE4 455 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 ATF7IP2Q5U623 682 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 AGMOQ6ZNB7 445 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 GRAMD1CQ8IYS0 662 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 HACE1Q8IYU2 909 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 SLC39A11Q8N1S5 342 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 EFHBQ8N7U6 833 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 ZNF507Q8TCN5 953 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 GSDMAQ96QA5 445 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 PDZD7Q9H5P4 517 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 TMEM206Q9H813 350 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 UBN1Q9NPG3 1134 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 TBC1D13Q9NVG8 400 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 RMND1Q9NWS8 449 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 EXOC7Q9UPT5 735 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 INPP5FQ9Y2H2 1132 aa10.82□□□□□ -0.68
GGA3-209ENST00000580646 BDP1A6H8Y1 2624 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 CARNS1A5YM72 827 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 NT5C1B-RDH14C9J2C7 533 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 ABLIM1O14639 778 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 PER2O15055 1255 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms