RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TCP11Q8WWU5 503 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 RABGGTAQ92696 567 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 GDAP1L1Q96MZ0 367 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PLCD4Q9BRC7 762 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ARHGAP20Q9P2F6 1191 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 EXOC7Q9UPT5 735 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 EIF3CLB5ME19 914 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SLC16A3O15427 465 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SEPT4O43236 478 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ZMYND10O75800 440 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ATP1A1P05023 1023 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PSEN2P49810 448 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MXD4Q14582 209 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SNRNP35Q16560 246 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 LONRF2Q1L5Z9 754 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 LMBRD2Q68DH5 695 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 IQCDQ96DY2 449 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 EIF3CQ99613 913 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SLC24A3Q9HC58 644 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ARFGAP3Q9NP61 516 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 EVPLQ92817 2033 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ZNF185O15231 689 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 AFPP02771 609 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 RARBP10826 455 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 GCLMP48507 274 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 KIF11P52732 1056 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PPP3CAQ08209 521 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 BFSP1Q12934 665 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 NFIL3Q16649 462 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 C1orf220Q5T0J3 134 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 GJB7Q6PEY0 223 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 LINC01465Q8N7H1 131 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SLC17A8Q8NDX2 589 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 TCHPQ9BT92 498 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 IFIH1Q9BYX4 1025 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
CDK5RAP3-217ENST00000580287 NOL4O94818 638 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 OAS2P29728 719 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 OSTNP61366 133 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 VSNL1P62760 191 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SLC20A2Q08357 652 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CEP112Q8N8E3 955 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 DNAJB3Q8WWF6 145 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SCLT1Q96NL6 688 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PSMB7Q99436 277 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CFHR5Q9BXR6 569 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 METTL14Q9HCE5 456 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MYO6Q9UM54 1294 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MGAMO43451 1857 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 H3BQF6 201 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ZNF263O14978 683 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 N4BP1O75113 896 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PRKCBP05771 671 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 DLATP10515 647 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SCARA3Q6AZY7 606 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CEP120Q8N960 986 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SH3TC2Q8TF17 1288 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CPB2Q96IY4 423 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CCDC113Q9H0I3 377 aa13.74□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MAGEB2O15479 319 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 FKTNO75072 461 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 TNFSF9P41273 254 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 VAMP7P51809 220 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 GJA9P57773 515 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PTENP60484 403 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 RAPGEF1Q13905 1077 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SMC1AQ14683 1233 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 KCNA10Q16322 511 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MAPK6Q16659 721 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 EEF1DP3Q658K8 133 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CDCA2Q69YH5 1023 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PDXDC1Q6P996 788 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 HVCN1Q96D96 273 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 JPH2Q9BR39 696 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 UBXN6Q9BZV1 441 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ABCB6Q9NP58 842 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 AJAP1Q9UKB5 411 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 TRIM17Q9Y577 477 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 HAS3O00219 553 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 GAS2O43903 313 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ADAMTS4O75173 837 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ASGR1P07306 291 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CYP2C9P11712 490 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PON1P27169 355 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 TMOD1P28289 359 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 FMO5P49326 533 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 VASPP50552 380 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 VAV2P52735 878 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MBTD1Q05BQ5 628 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 GFPT1Q06210 699 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 FAM47CQ5HY64 1035 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CRELD2Q6UXH1 353 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ZBTB8OSQ8IWT0 167 aa13.73□□□□□ -0.21
CDK5RAP3-217ENST00000580287 C12orf56Q8IXR9 622 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms