RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 ARHGEF15O94989 841 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 LDHAP00338 332 aaKnown RBP12.59□□□□□ -0.39
ERBB2-208ENST00000578630 THP07101 528 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 CLTAP09496 248 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 MLH1P40692 756 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 CASP5P51878 434 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 OSTNP61366 133 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 SNRPFP62306 86 aaKnown RBP12.59□□□□□ -0.39
ERBB2-208ENST00000578630 KRT17Q04695 432 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 EHHADHQ08426 723 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 GPM6BQ13491 265 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 KCNB1Q14721 858 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 KCNT2Q6UVM3 1135 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 POMGNT1Q8WZA1 660 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 P2RX5Q93086 422 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 GSDMAQ96QA5 445 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 CDX2Q99626 313 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-208ENST00000578630 MSTO1Q9BUK6 570 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 GBP3Q9H0R5 595 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 NRDE2Q9H7Z3 1164 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 PLEKHA5Q9HAU0 1116 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 PUF60Q9UHX1 559 aaKnown RBP12.59□□□□□ -0.39
ERBB2-208ENST00000578630 AGO2Q9UKV8 859 aaKnown RBP12.59□□□□□ -0.39
ERBB2-208ENST00000578630 FAN1Q9Y2M0 1017 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 STYXL1Q9Y6J8 313 aa12.59□□□□□ -0.39
ERBB2-208ENST00000578630 ANKRD63C9JTQ0 380 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 ABLIM1O14639 778 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 RHOBTB3O94955 611 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 GARTP22102 1010 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 IGFBP4P22692 258 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 PPM1AP35813 382 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 SCNN1GP51170 649 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 POU5F1Q01860 360 aaKnown RBP12.58□□□□□ -0.4
ERBB2-208ENST00000578630 KCNA1Q09470 495 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 STK4Q13043 487 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 PNOCQ13519 176 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 HSP90AA2PQ14568 343 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-208ENST00000578630 BMS1Q14692 1282 aaKnown RBP12.58□□□□□ -0.4
ERBB2-208ENST00000578630 PTPROQ16827 1216 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-208ENST00000578630 HS2ST1Q7LGA3 356 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 CD302Q8IX05 232 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 KLHL23Q8NBE8 558 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 COLGALT1Q8NBJ5 622 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 SCFD1Q8WVM8 642 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 SMARCE1Q969G3 411 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 ZFP42Q96MM3 310 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 TMEM175Q9BSA9 504 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 RPF1Q9H9Y2 349 aaKnown RBP12.58□□□□□ -0.4
ERBB2-208ENST00000578630 MIOSQ9NXC5 875 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 LMCD1Q9NZU5 365 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 CGNQ9P2M7 1197 aaKnown RBP12.58□□□□□ -0.4
ERBB2-208ENST00000578630 UBE4BO95155 1302 aa12.58□□□□□ -0.4
ERBB2-208ENST00000578630 LAMA3Q16787 3333 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 RFXAPO00287 272 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 ZC3H11AO75152 810 aaKnown RBP eCLIP12.57□□□□□ -0.4
ERBB2-208ENST00000578630 GALTP07902 379 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 BCAR1P56945 870 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 PLCB3Q01970 1234 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 UBE3AQ05086 875 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 GRIK3Q13003 919 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 KNOP1Q1ED39 458 aaKnown RBP12.57□□□□□ -0.4
ERBB2-208ENST00000578630 ARMCX5Q6P1M9 558 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 ZNF280BQ86YH2 543 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 CEP120Q8N960 986 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 GSTCDQ8NEC7 633 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 GOLGA5Q8TBA6 731 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 TMEM169Q96HH4 297 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 TSPAN18Q96SJ8 248 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 COLEC11Q9BWP8 271 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 FGFBP2Q9BYJ0 223 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 SLC38A7Q9NVC3 462 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 STK39Q9UEW8 545 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 PLAGL2Q9UPG8 496 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 PCDHA5Q9Y5H7 936 aa12.57□□□□□ -0.4
ERBB2-208ENST00000578630 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-208ENST00000578630 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 XPOTO43592 962 aaKnown RBP12.56□□□□□ -0.4
ERBB2-208ENST00000578630 FGF18O76093 207 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 DDHD2O94830 711 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 LINC00271P0C7V0 271 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 FOSL2P15408 326 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 POU3F3P20264 500 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-208ENST00000578630 OR1G1P47890 313 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 AFF1P51825 1210 aaKnown RBP12.56□□□□□ -0.4
ERBB2-208ENST00000578630 TUSC3Q13454 348 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 BMT2Q1RMZ1 405 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 SLC10A6Q3KNW5 377 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 SEZ6Q53EL9 994 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 XKR4Q5GH76 650 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 SLC39A4Q6P5W5 647 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 ALKAL1Q6UXT8 129 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 SPRED2Q7Z698 418 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 COLGALT2Q8IYK4 626 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms