RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ADAMTS10Q9H324 1103 aa8.79□□□□□ -1
COPS3-215ENST00000578317 KCTD10Q9H3F6 313 aa8.79□□□□□ -1
COPS3-215ENST00000578317 SEMA6BQ9H3T3 888 aa8.79□□□□□ -1
COPS3-215ENST00000578317 FZD8Q9H461 694 aa8.79□□□□□ -1
COPS3-215ENST00000578317 TBC1D7Q9P0N9 293 aa8.79□□□□□ -1
COPS3-215ENST00000578317 TBX20Q9UMR3 447 aa8.79□□□□□ -1
COPS3-215ENST00000578317 TRAF3IP3Q9Y228 551 aa8.79□□□□□ -1
COPS3-215ENST00000578317 MROH7Q68CQ1 1323 aa8.78□□□□□ -1
COPS3-215ENST00000578317 ADGRA3Q8IWK6 1321 aa8.78□□□□□ -1
COPS3-215ENST00000578317 BICDL2A1A5D9 508 aa8.78□□□□□ -1
COPS3-215ENST00000578317 SMTNL1A8MU46 457 aa8.78□□□□□ -1
COPS3-215ENST00000578317 J3QL48 77 aa8.78□□□□□ -1
COPS3-215ENST00000578317 ACKR2O00590 384 aa8.78□□□□□ -1
COPS3-215ENST00000578317 SLC16A4O15374 487 aa8.78□□□□□ -1
COPS3-215ENST00000578317 PRPF6O94906 941 aaKnown RBP8.78□□□□□ -1
COPS3-215ENST00000578317 CD4P01730 458 aa8.78□□□□□ -1
COPS3-215ENST00000578317 PIGRP01833 764 aa8.78□□□□□ -1
COPS3-215ENST00000578317 SRGAP2CP0DJJ0 459 aa8.78□□□□□ -1
COPS3-215ENST00000578317 MYBP10242 640 aa8.78□□□□□ -1
COPS3-215ENST00000578317 PHKA2P46019 1235 aa8.78□□□□□ -1
COPS3-215ENST00000578317 CRYBB1P53674 252 aaPredicted RBP8.78□□□□□ -1
COPS3-215ENST00000578317 NLRP11P59045 1033 aaKnown RBP8.78□□□□□ -1
COPS3-215ENST00000578317 PRR20EP86478 221 aa8.78□□□□□ -1
COPS3-215ENST00000578317 PRR20CP86479 221 aa8.78□□□□□ -1
COPS3-215ENST00000578317 PRR20DP86480 221 aa8.78□□□□□ -1
COPS3-215ENST00000578317 PRR20BP86481 221 aa8.78□□□□□ -1
COPS3-215ENST00000578317 PRR20AP86496 221 aa8.78□□□□□ -1
COPS3-215ENST00000578317 RBL2Q08999 1139 aa8.78□□□□□ -1
COPS3-215ENST00000578317 PAK1Q13153 545 aa8.78□□□□□ -1
COPS3-215ENST00000578317 NCAPHQ15003 741 aa8.78□□□□□ -1
COPS3-215ENST00000578317 SNX17Q15036 470 aa8.78□□□□□ -1
COPS3-215ENST00000578317 ZCWPW2Q504Y3 356 aa8.78□□□□□ -1
COPS3-215ENST00000578317 ZC2HC1CQ53FD0 456 aaPredicted RBP8.78□□□□□ -1
COPS3-215ENST00000578317 FAM26DQ5JW98 314 aa8.78□□□□□ -1
COPS3-215ENST00000578317 TTI2Q6NXR4 508 aa8.78□□□□□ -1
COPS3-215ENST00000578317 ZPBP2Q6X784 338 aa8.78□□□□□ -1
COPS3-215ENST00000578317 SLC39A5Q6ZMH5 540 aa8.78□□□□□ -1
COPS3-215ENST00000578317 RUFY4Q6ZNE9 571 aa8.78□□□□□ -1
COPS3-215ENST00000578317 C11orf57Q6ZUT1 292 aaPredicted RBP8.78□□□□□ -1
COPS3-215ENST00000578317 SRGAP1Q7Z6B7 1085 aa8.78□□□□□ -1
COPS3-215ENST00000578317 GAS2L3Q86XJ1 694 aa8.78□□□□□ -1
COPS3-215ENST00000578317 KSR1Q8IVT5 923 aa8.78□□□□□ -1
COPS3-215ENST00000578317 ZBTB8OSQ8IWT0 167 aa8.78□□□□□ -1
COPS3-215ENST00000578317 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
COPS3-215ENST00000578317 HELQQ8TDG4 1101 aa8.78□□□□□ -1
COPS3-215ENST00000578317 DNAJB3Q8WWF6 145 aa8.78□□□□□ -1
COPS3-215ENST00000578317 P2RX5Q93086 422 aa8.78□□□□□ -1
COPS3-215ENST00000578317 ACCSQ96QU6 501 aa8.78□□□□□ -1
COPS3-215ENST00000578317 MED15Q96RN5 788 aa8.78□□□□□ -1
COPS3-215ENST00000578317 INO80BQ9C086 356 aaPredicted RBP8.78□□□□□ -1
COPS3-215ENST00000578317 GBP3Q9H0R5 595 aa8.78□□□□□ -1
COPS3-215ENST00000578317 KIAA1522Q9P206 1035 aaPredicted RBP8.78□□□□□ -1
COPS3-215ENST00000578317 EXOC7Q9UPT5 735 aa8.78□□□□□ -1
COPS3-215ENST00000578317 MAPK8IP1Q9UQF2 711 aa8.78□□□□□ -1
COPS3-215ENST00000578317 AKT3Q9Y243 479 aa8.78□□□□□ -1
COPS3-215ENST00000578317 SQORQ9Y6N5 450 aa8.78□□□□□ -1
COPS3-215ENST00000578317 SCN10AQ9Y5Y9 1956 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 A0A087WZ62 844 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 LRRIQ4A6NIV6 560 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 K7ENM7 598 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 TGFB1I1O43294 461 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 VTNP04004 478 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 EIF4BP23588 611 aaKnown RBP8.77□□□□□ -1.01
COPS3-215ENST00000578317 MYL5Q02045 173 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 MTMR3Q13615 1198 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 MAPK6Q16659 721 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 TRIM71Q2Q1W2 868 aaKnown RBP8.77□□□□□ -1.01
COPS3-215ENST00000578317 EDRF1Q3B7T1 1238 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 SPATA1Q5VX52 437 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 ANKRD40Q6AI12 368 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 UBE2Q1Q7Z7E8 422 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 SLC9A9Q8IVB4 645 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 C12orf56Q8IXR9 622 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 FAM126BQ8IXS8 530 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 ZC3H3Q8IXZ2 948 aaKnown RBP8.77□□□□□ -1.01
COPS3-215ENST00000578317 NELFBQ8WX92 580 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 SCG3Q8WXD2 468 aaKnown RBP8.77□□□□□ -1.01
COPS3-215ENST00000578317 ASB16Q96NS5 453 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 FDXACB1Q9BRP7 624 aaPredicted RBP8.77□□□□□ -1.01
COPS3-215ENST00000578317 GCOM2Q9BZD3 368 aaPredicted RBP8.77□□□□□ -1.01
COPS3-215ENST00000578317 SENP6Q9GZR1 1112 aaPredicted RBP8.77□□□□□ -1.01
COPS3-215ENST00000578317 CCDC113Q9H0I3 377 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 CBX8Q9HC52 389 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 CYLDQ9NQC7 956 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 TMPRSS4Q9NRS4 437 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 TYW1Q9NV66 732 aaKnown RBP8.77□□□□□ -1.01
COPS3-215ENST00000578317 STYXL1Q9Y6J8 313 aa8.77□□□□□ -1.01
COPS3-215ENST00000578317 B4GALT4O60513 344 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 DARSP14868 501 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 MRPS6P82932 125 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 FKBP3Q00688 224 aaKnown RBP8.76□□□□□ -1.01
COPS3-215ENST00000578317 MBTD1Q05BQ5 628 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 MGAT3Q09327 533 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 STRN3Q13033 797 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 UVSSAQ2YD98 709 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 KLHL10Q6JEL2 608 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 TSHZ1Q6ZSZ6 1077 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 HS2ST1Q7LGA3 356 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 NECAB2Q7Z6G3 386 aa8.76□□□□□ -1.01
COPS3-215ENST00000578317 DHX40Q8IX18 779 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms