RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 TMEM173Q86WV6 379 aaPredicted RBP25.31■■□□□ 1.64
LIMD2-204ENST00000578297 STAMQ92783 540 aa25.31■■□□□ 1.64
LIMD2-204ENST00000578297 BICD1Q96G01 975 aa25.31■■□□□ 1.64
LIMD2-204ENST00000578297 THEGQ9P2T0 379 aa25.31■■□□□ 1.64
LIMD2-204ENST00000578297 CLDN3O15551 220 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 MCL1Q07820 350 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 NOLC1Q14978 699 aaKnown RBP eCLIP25.3■■□□□ 1.64
LIMD2-204ENST00000578297 HERC4Q5GLZ8 1057 aaPredicted RBP25.3■■□□□ 1.64
LIMD2-204ENST00000578297 CNNM4Q6P4Q7 775 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 MAP4K3Q8IVH8 894 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 CEP120Q8N960 986 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 MICAL1Q8TDZ2 1067 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 HLA-CQ95604 372 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 PPP2R3CQ969Q6 453 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 CCDC94Q9BW85 323 aaPredicted RBP25.3■■□□□ 1.64
LIMD2-204ENST00000578297 STRA6Q9BX79 667 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 TRIM9Q9C026 710 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 MRPL44Q9H9J2 332 aaKnown RBP25.3■■□□□ 1.64
LIMD2-204ENST00000578297 OLFML3Q9NRN5 406 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 PANK4Q9NVE7 773 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 ANKFY1Q9P2R3 1169 aa25.3■■□□□ 1.64
LIMD2-204ENST00000578297 PTGESO14684 152 aa25.29■■□□□ 1.64
LIMD2-204ENST00000578297 HNRNPDLO14979 420 aaKnown RBP25.29■■□□□ 1.64
LIMD2-204ENST00000578297 NCK2O43639 380 aa25.29■■□□□ 1.64
LIMD2-204ENST00000578297 LIG4P49917 911 aa25.29■■□□□ 1.64
LIMD2-204ENST00000578297 COL19A1Q14993 1142 aa25.29■■□□□ 1.64
LIMD2-204ENST00000578297 ZC2HC1CQ53FD0 456 aaPredicted RBP25.29■■□□□ 1.64
LIMD2-204ENST00000578297 DDX53Q86TM3 631 aaKnown RBP25.29■■□□□ 1.64
LIMD2-204ENST00000578297 CCDC65Q8IXS2 484 aa25.29■■□□□ 1.64
LIMD2-204ENST00000578297 BCL7CQ8WUZ0 217 aaPredicted RBP25.29■■□□□ 1.64
LIMD2-204ENST00000578297 ATXN2LQ8WWM7 1075 aaKnown RBP25.29■■□□□ 1.64
LIMD2-204ENST00000578297 HVCN1Q96D96 273 aa25.29■■□□□ 1.64
LIMD2-204ENST00000578297 C7orf25Q9BPX7 421 aa25.29■■□□□ 1.64
LIMD2-204ENST00000578297 NGRNQ9NPE2 291 aaKnown RBP25.29■■□□□ 1.64
LIMD2-204ENST00000578297 STK39Q9UEW8 545 aa25.29■■□□□ 1.64
LIMD2-204ENST00000578297 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.28■■□□□ 1.64
LIMD2-204ENST00000578297 NR1I2O75469 434 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 PPP1R37O75864 691 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 THP07101 528 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 OR1G1P47890 313 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 YARSP54577 528 aaKnown RBP25.28■■□□□ 1.64
LIMD2-204ENST00000578297 HYAL1Q12794 435 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 ALKAL1Q6UXT8 129 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 ACAP3Q96P50 834 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 TCF25Q9BQ70 676 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 CXCL16Q9H2A7 254 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 TOPORSQ9NS56 1045 aaPredicted RBP25.28■■□□□ 1.64
LIMD2-204ENST00000578297 HPSEQ9Y251 543 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 PCDHGC5Q9Y5F6 944 aa25.28■■□□□ 1.64
LIMD2-204ENST00000578297 A0A1B0GVL5 298 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 PFKFB1P16118 471 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 OSTNP61366 133 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 TUSC3Q13454 348 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 XKR4Q5GH76 650 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 TMC7Q7Z402 723 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 ADGRD2Q7Z7M1 963 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 HAPLN2Q9GZV7 340 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 ENTPD7Q9NQZ7 604 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 TBC1D7Q9P0N9 293 aa25.27■■□□□ 1.64
LIMD2-204ENST00000578297 FAM237AA0A1B0GTK4 181 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 A0A1W2PQ27 194 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 A0A1W2PQ64 194 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 A0A1W2PQD8 194 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 SLFN14P0C7P3 912 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 HARSP12081 509 aaKnown RBP25.26■■□□□ 1.63
LIMD2-204ENST00000578297 MATR3P43243 847 aaKnown RBP eCLIP25.26■■□□□ 1.63
LIMD2-204ENST00000578297 NAB2Q15742 525 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 PLPP4Q5VZY2 271 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 CEP57L1Q8IYX8 460 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 VPS52Q8N1B4 723 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 PABPC5Q96DU9 382 aaKnown RBP25.26■■□□□ 1.63
LIMD2-204ENST00000578297 COLEC11Q9BWP8 271 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 GDPD2Q9HCC8 539 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 MARCH5Q9NX47 278 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 USP25Q9UHP3 1055 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 SERTAD1Q9UHV2 236 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 CIZ1Q9ULV3 898 aaPredicted RBP25.26■■□□□ 1.63
LIMD2-204ENST00000578297 PRG3Q9Y2Y8 225 aaPredicted RBP25.26■■□□□ 1.63
LIMD2-204ENST00000578297 PCDHB13Q9Y5F0 798 aa25.26■■□□□ 1.63
LIMD2-204ENST00000578297 ASIC1P78348 528 aa25.25■■□□□ 1.63
LIMD2-204ENST00000578297 MRPS5P82675 430 aaKnown RBP25.25■■□□□ 1.63
LIMD2-204ENST00000578297 COASYQ13057 564 aa25.25■■□□□ 1.63
LIMD2-204ENST00000578297 ALCAMQ13740 583 aa25.25■■□□□ 1.63
LIMD2-204ENST00000578297 BMS1Q14692 1282 aaKnown RBP25.25■■□□□ 1.63
LIMD2-204ENST00000578297 KYAT1Q16773 422 aa25.25■■□□□ 1.63
LIMD2-204ENST00000578297 CTC1Q2NKJ3 1217 aa25.25■■□□□ 1.63
LIMD2-204ENST00000578297 L1TD1Q5T7N2 865 aaKnown RBP25.25■■□□□ 1.63
LIMD2-204ENST00000578297 SLC39A4Q6P5W5 647 aa25.25■■□□□ 1.63
LIMD2-204ENST00000578297 PPP1R10Q96QC0 940 aaKnown RBP25.25■■□□□ 1.63
LIMD2-204ENST00000578297 VN1R3Q9BXE9 311 aa25.25■■□□□ 1.63
LIMD2-204ENST00000578297 ZBP1Q9H171 429 aa25.25■■□□□ 1.63
LIMD2-204ENST00000578297 UBE2ZQ9H832 354 aaPredicted RBP25.25■■□□□ 1.63
LIMD2-204ENST00000578297 TRIP11Q15643 1979 aa25.24■■□□□ 1.63
LIMD2-204ENST00000578297 A0A0B4J269 797 aa25.24■■□□□ 1.63
LIMD2-204ENST00000578297 ACTN4O43707 911 aaKnown RBP25.24■■□□□ 1.63
LIMD2-204ENST00000578297 GCNT3O95395 438 aa25.24■■□□□ 1.63
LIMD2-204ENST00000578297 NRIP1P48552 1158 aa25.24■■□□□ 1.63
LIMD2-204ENST00000578297 SMC1AQ14683 1233 aaKnown RBP25.24■■□□□ 1.63
LIMD2-204ENST00000578297 AAK1Q2M2I8 961 aa25.24■■□□□ 1.63
LIMD2-204ENST00000578297 MRPL43Q8N983 215 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms