RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 DGAT1O75907 488 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 PYGMP11217 842 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 ATP4AP20648 1035 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 ACOT2P49753 483 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 HADHBP55084 474 aaKnown RBP18.88■□□□□ 0.61
ERBB2-205ENST00000578199 MKRN4PQ13434 485 aaPredicted RBP18.88■□□□□ 0.61
ERBB2-205ENST00000578199 XRRA1Q6P2D8 792 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 CATSPERGQ6ZRH7 1159 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 RDM1Q8NG50 284 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 BCAS4Q8TDM0 211 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 ATP6V1G3Q96LB4 118 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 ZSWIM1Q9BR11 485 aa18.88■□□□□ 0.61
ERBB2-205ENST00000578199 EIF3HO15372 352 aaKnown RBP eCLIP18.87■□□□□ 0.611e-6■□□□□ 8.3
ERBB2-205ENST00000578199 HPDP32754 393 aaPredicted RBP18.87■□□□□ 0.61
ERBB2-205ENST00000578199 CCT5P48643 541 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 PEX5P50542 639 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 DHX9Q08211 1270 aaKnown RBP18.87■□□□□ 0.61
ERBB2-205ENST00000578199 C11orf63Q6NUN7 778 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 ZNF564Q8TBZ8 553 aaPredicted RBP18.87■□□□□ 0.61
ERBB2-205ENST00000578199 DDX1Q92499 740 aaKnown RBP18.87■□□□□ 0.61
ERBB2-205ENST00000578199 ZBTB45Q96K62 511 aaPredicted RBP18.87■□□□□ 0.61
ERBB2-205ENST00000578199 TEX13BQ9BXU2 312 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 ACAD9Q9H845 621 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 BCCIPQ9P287 314 aaKnown RBP eCLIP18.87■□□□□ 0.61
ERBB2-205ENST00000578199 DIS3Q9Y2L1 958 aaKnown RBP18.87■□□□□ 0.61
ERBB2-205ENST00000578199 SNX24Q9Y343 169 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 FZD9O00144 591 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 GRIN3BO60391 1043 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 GZMAP12544 262 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 PDE6CP51160 858 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 CDR2Q01850 454 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 SPOPLQ6IQ16 392 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 LLGL2Q6P1M3 1020 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 TMC3Q7Z5M5 1100 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 EIF1ADQ8N9N8 165 aaKnown RBP18.87■□□□□ 0.61
ERBB2-205ENST00000578199 SEC14L1Q92503 715 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 KLRG1Q96E93 195 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 ATP6V0A4Q9HBG4 840 aa18.87■□□□□ 0.61
ERBB2-205ENST00000578199 SPDYE16A6NNV3 312 aaPredicted RBP18.86■□□□□ 0.61
ERBB2-205ENST00000578199 MYO1CO00159 1063 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 TULP2O00295 520 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 SSTR3P32745 418 aaPredicted RBP18.86■□□□□ 0.61
ERBB2-205ENST00000578199 SKOR1P84550 965 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 ZNF844Q08AG5 666 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 SEPT14Q6ZU15 432 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 UBL4BQ8N7F7 174 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 PRELID2Q8N945 189 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 TMC2Q8TDI7 906 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.86■□□□□ 0.61
ERBB2-205ENST00000578199 LRRC45Q96CN5 670 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 TMBIM4Q9HC24 238 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 PNMA2Q9UL42 364 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 ATP8A1Q9Y2Q0 1164 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 ARID2Q68CP9 1835 aa18.86■□□□□ 0.61
ERBB2-205ENST00000578199 GOLGA6L10A0A0M3HER8 536 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 SPOPO43791 374 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 NR1D1P20393 614 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 NLRP11P59045 1033 aaKnown RBP18.85■□□□□ 0.61
ERBB2-205ENST00000578199 SCARA3Q6AZY7 606 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 TTC27Q6P3X3 843 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 C10orf67Q8IYJ2 551 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 MCPH1Q8NEM0 835 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 HVCN1Q96D96 273 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 IFT74Q96LB3 600 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 TRIM7Q9C029 511 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 HAPLN2Q9GZV7 340 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 GGA3Q9NZ52 723 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 MYO1FO00160 1098 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 LIG4P49917 911 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 POLGP54098 1239 aaPredicted RBP18.85■□□□□ 0.61
ERBB2-205ENST00000578199 SEZ6Q53EL9 994 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 BRDTQ58F21 947 aaPredicted RBP18.85■□□□□ 0.61
ERBB2-205ENST00000578199 ZBTB41Q5SVQ8 909 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 JAMLQ86YT9 394 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 NAP1L3Q99457 506 aaPredicted RBP18.85■□□□□ 0.61
ERBB2-205ENST00000578199 ERP44Q9BS26 406 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 C17orf75Q9HAS0 396 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 ARHGAP28Q9P2N2 729 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 PTPRJQ12913 1337 aa18.85■□□□□ 0.61
ERBB2-205ENST00000578199 MYH9P35579 1960 aaKnown RBP18.84■□□□□ 0.61
ERBB2-205ENST00000578199 TNNI1P19237 187 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 OAZ1P54368 228 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 PLTPP55058 493 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 MCCD1P59942 119 aaPredicted RBP18.84■□□□□ 0.61
ERBB2-205ENST00000578199 IRX5P78411 483 aaPredicted RBP18.84■□□□□ 0.61
ERBB2-205ENST00000578199 DUPD1Q68J44 220 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 ASAP3Q8TDY4 903 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 CPA5Q8WXQ8 436 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 CD101Q93033 1021 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 MAGOHBQ96A72 148 aaKnown RBP18.84■□□□□ 0.61
ERBB2-205ENST00000578199 C12orf42Q96LP6 360 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 FAM114A2Q9NRY5 505 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 MIF4GDA9UHW6 222 aaKnown RBP18.84■□□□□ 0.61
ERBB2-205ENST00000578199 C19orf81C9J6K1 198 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 SUPT20HL2P0C7V6 817 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 EMC2Q15006 297 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 SUPT20HL1Q3ZLR7 823 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 MIS18BP1Q6P0N0 1132 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms