RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 HNRNPH3P31942 346 aaKnown RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 POLR2FP61218 127 aaKnown RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 PTPN11Q06124 597 aaPredicted RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 NCBP1Q09161 790 aaKnown RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 MEA1Q16626 185 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 ZBTB41Q5SVQ8 909 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 PDXDC1Q6P996 788 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 INTS2Q9H0H0 1204 aaKnown RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 PDZD7Q9H5P4 517 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 SIX2Q9NPC8 291 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 CPSF3Q9UKF6 684 aaKnown RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 ACTN1P12814 892 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 RFX1P22670 979 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 EIF4BP23588 611 aaKnown RBP20.12■□□□□ 0.81
PRKCA-203ENST00000578063 CRYBB1P53674 252 aaPredicted RBP20.12■□□□□ 0.81
PRKCA-203ENST00000578063 SURF1Q15526 300 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 KYAT1Q16773 422 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 EPC2Q52LR7 807 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 RRAGAQ7L523 313 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 APBB1IPQ7Z5R6 666 aaPredicted RBP20.12■□□□□ 0.81
PRKCA-203ENST00000578063 SERINC5Q86VE9 423 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 ARRDC4Q8NCT1 418 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 EHBP1Q8NDI1 1231 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 MYO6Q9UM54 1294 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 PLAGL2Q9UPG8 496 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 COQ4Q9Y3A0 265 aa20.12■□□□□ 0.81
PRKCA-203ENST00000578063 A0A1B0GUA9 196 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 LRRC53A6NM62 1247 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 M0QZ92 97 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 CDK17Q00537 523 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 POU5F1Q01860 360 aaKnown RBP20.11■□□□□ 0.81
PRKCA-203ENST00000578063 CATSPER4Q7RTX7 472 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 RPAINQ86UA6 219 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 SH3TC2Q8TF17 1288 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 SYN2Q92777 582 aaPredicted RBP20.11■□□□□ 0.81
PRKCA-203ENST00000578063 GLT1D1Q96MS3 346 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 CGRRF1Q99675 332 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 ADPGKQ9BRR6 497 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 NLRC4Q9NPP4 1024 aa20.11■□□□□ 0.81
PRKCA-203ENST00000578063 TNNI1P19237 187 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 MRPS6P82932 125 aaKnown RBP20.1■□□□□ 0.81
PRKCA-203ENST00000578063 APBA1Q02410 837 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 ITGA7Q13683 1181 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 SNX17Q15036 470 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 LMO3Q8TAP4 145 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 CPB2Q96IY4 423 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 POP1Q99575 1024 aaKnown RBP20.1■□□□□ 0.81
PRKCA-203ENST00000578063 CDHR5Q9HBB8 845 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 PDE11AQ9HCR9 933 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 TOPORSQ9NS56 1045 aaPredicted RBP20.1■□□□□ 0.81
PRKCA-203ENST00000578063 KCND1Q9NSA2 647 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 APEX2Q9UBZ4 518 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 GRIN2DO15399 1336 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 SOWAHDA6NJG2 315 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 AXLP30530 894 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 TNFSF9P41273 254 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 AP3M2P53677 418 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 DCAF4L1Q3SXM0 396 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 SEZ6Q53EL9 994 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 WDR59Q6PJI9 974 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 SV2AQ7L0J3 742 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 CDR2LQ86X02 465 aaPredicted RBP20.1■□□□□ 0.81
PRKCA-203ENST00000578063 THNSL1Q8IYQ7 743 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 FBXL13Q8NEE6 735 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 VTI1AQ96AJ9 217 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 SPAG5Q96R06 1193 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 FHOD1Q9Y613 1164 aa20.1■□□□□ 0.81
PRKCA-203ENST00000578063 TULP1O00294 542 aaPredicted RBP20.09■□□□□ 0.81
PRKCA-203ENST00000578063 CCP110O43303 1012 aa20.09■□□□□ 0.81
PRKCA-203ENST00000578063 C15orf39Q6ZRI6 1047 aa20.09■□□□□ 0.81
PRKCA-203ENST00000578063 WDR49Q8IV35 697 aa20.09■□□□□ 0.81
PRKCA-203ENST00000578063 CELF4Q9BZC1 486 aaKnown RBP20.09■□□□□ 0.81
PRKCA-203ENST00000578063 TRPV2Q9Y5S1 764 aa20.09■□□□□ 0.81
PRKCA-203ENST00000578063 CLTAP09496 248 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 FGFR4P22455 802 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 WNT7BP56706 349 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 PTGISQ16647 500 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 ZACNQ401N2 412 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 SLC9C1Q4G0N8 1177 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 SFMBT2Q5VUG0 894 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 NOTUMQ6P988 496 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 FMNL3Q8IVF7 1028 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 DNAJC5GQ8N7S2 189 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 RPF1Q9H9Y2 349 aaKnown RBP20.08■□□□□ 0.81
PRKCA-203ENST00000578063 SPTLC3Q9NUV7 552 aa20.08■□□□□ 0.81
PRKCA-203ENST00000578063 FRMPD3Q5JV73 1810 aa20.08■□□□□ 0.8
PRKCA-203ENST00000578063 HTTP42858 3142 aa20.08■□□□□ 0.8
PRKCA-203ENST00000578063 KBTBD13C9JR72 458 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 IL18RAPO95256 599 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 RAPGEF1Q13905 1077 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 ENOX2Q16206 610 aaKnown RBP20.07■□□□□ 0.8
PRKCA-203ENST00000578063 E4F1Q66K89 784 aaPredicted RBP20.07■□□□□ 0.8
PRKCA-203ENST00000578063 IQCEQ6IPM2 695 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 RAD9BQ6WBX8 426 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 C17orf53Q8N3J3 647 aaPredicted RBP20.07■□□□□ 0.8
PRKCA-203ENST00000578063 CEP120Q8N960 986 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 TMEM40Q8WWA1 233 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 UNC93B1Q9H1C4 597 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 RAB20Q9NX57 234 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms