RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 IER5LQ5T953 404 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 C15orf39Q6ZRI6 1047 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 ALYREFQ86V81 257 aaKnown RBP16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 UBALD2Q8IYN6 164 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 SNX29Q8TEQ0 813 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 KIFAP3Q92845 792 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 B3GALT6Q96L58 329 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 PRRX2Q99811 253 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 CCDC113Q9H0I3 377 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 RXFP1Q9HBX9 757 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 CACNG4Q9UBN1 327 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 USP20Q9Y2K6 914 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
RN7SL560P-201ENST00000577943 CCDC195A0A1B0GUA6 201 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 CASTOR2A6NHX0 329 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 ST18O60284 1047 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 THP07101 528 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 TOB1P50616 345 aaPredicted RBP16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 EFNA5P52803 228 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 RABEP1Q15276 862 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 MCTP1Q6DN14 999 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 OTOP3Q7RTS5 596 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 GLYCTKQ8IVS8 523 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 HASPINQ8TF76 798 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 RIN2Q8WYP3 895 aaPredicted RBP16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 KIFC3Q9BVG8 833 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 CHST7Q9NS84 486 aa16.47■□□□□ 0.23
RN7SL560P-201ENST00000577943 LAD1O00515 517 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 RECQL4O94761 1208 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 SPATA31D3P0C874 917 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 HSP90AA2PQ14568 343 aaPredicted RBP16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 DCAF4L1Q3SXM0 396 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 KRT79Q5XKE5 535 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 EEF1DP3Q658K8 133 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 SPATA31D4Q6ZUB0 917 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 PALB2Q86YC2 1186 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 IGSF22Q8N9C0 903 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 PRSS33Q8NF86 280 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 CMASQ8NFW8 434 aaPredicted RBP16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 PAAF1Q9BRP4 392 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 SMOC2Q9H3U7 446 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 DNM3Q9UQ16 869 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 GDAQ9Y2T3 454 aa16.46■□□□□ 0.23
RN7SL560P-201ENST00000577943 PIEZO1Q92508 2521 aa16.46■□□□□ 0.22
RN7SL560P-201ENST00000577943 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 K7ERI5 159 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 PTGESO14684 152 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 PDGFBP01127 241 aaPredicted RBP16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 EDN1P05305 212 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 AVPR2P30518 371 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 MRE11P49959 708 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 PTPN5P54829 565 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 VCPP55072 806 aaKnown RBP16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 CREMQ03060 361 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 DTHD1Q6ZMT9 781 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 GPR65Q8IYL9 337 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 PLEKHA4Q9H4M7 779 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 FNIP2Q9P278 1114 aa16.45■□□□□ 0.22
RN7SL560P-201ENST00000577943 CCDC169A6NNP5 214 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 PP2D1A8MPX8 630 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 E9PMD0 336 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 TGM5O43548 720 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 RFPL2O75678 378 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 RPL17P18621 184 aaKnown RBP16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 CDC25AP30304 524 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 PRPHP41219 470 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 PEX3P56589 373 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 ATF7IP2Q5U623 682 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 CYP26C1Q6V0L0 522 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 APBB1IPQ7Z5R6 666 aaPredicted RBP16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 CEP57Q86XR8 500 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 HDAC7Q8WUI4 952 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 SMG7Q92540 1137 aaKnown RBP16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 STAMQ92783 540 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 CXCL16Q9H2A7 254 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 PIDD1Q9HB75 910 aa16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 DAXXQ9UER7 740 aaPredicted RBP16.44■□□□□ 0.22
RN7SL560P-201ENST00000577943 HIP1RO75146 1068 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 KIF4AO95239 1232 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 C1RP00736 705 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 GBP2P32456 591 aaPredicted RBP16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 DMP1Q13316 513 aaPredicted RBP16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 RILPL1Q5EBL4 403 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 RTP2Q5QGT7 225 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 NT5DC1Q5TFE4 455 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 FAM171A1Q5VUB5 890 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 PRSS55Q6UWB4 352 aaPredicted RBP16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 TTPALQ9BTX7 342 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 WDR6Q9NNW5 1121 aaKnown RBP16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 PDCD11Q14690 1871 aaKnown RBP16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 CLUHO75153 1309 aa16.43■□□□□ 0.22
RN7SL560P-201ENST00000577943 H3BQV1 296 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 NPTX2P47972 431 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 ELAVL2Q12926 359 aaKnown RBP16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 ZRSR1Q15695 479 aaKnown RBP16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 NAB2Q15742 525 aa16.42■□□□□ 0.22
RN7SL560P-201ENST00000577943 IL17AQ16552 155 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms