RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SMARCA1P28370 1054 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 ADSLP30566 484 aaPredicted RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 PTPN7P35236 360 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 SREBF1P36956 1147 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 MRPL49Q13405 166 aaKnown RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 GRM7Q14831 915 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 CCDC157Q569K6 752 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 DCAF17Q5H9S7 520 aaPredicted RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 FKBP15Q5T1M5 1219 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 CCSAPQ6IQ19 270 aaPredicted RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 ABHD15Q6UXT9 468 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 GADL1Q6ZQY3 521 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 DOK3Q7L591 496 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 ZNF572Q7Z3I7 529 aaPredicted RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 SRGAP1Q7Z6B7 1085 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 C11orf96Q7Z7L8 435 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 TAX1BP1Q86VP1 789 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 CCAR1Q8IX12 1150 aaKnown RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 RHOT1Q8IXI2 618 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 GSPT2Q8IYD1 628 aaKnown RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 CAMKK1Q8N5S9 505 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 C3orf20Q8ND61 904 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 ZFP28Q8NHY6 868 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 HPS3Q969F9 1004 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 MVB12AQ96EY5 273 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 CDK5RAP3Q96JB5 506 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 SAMD11Q96NU1 681 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 SLC2A13Q96QE2 648 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 LRRC37BQ96QE4 947 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 CDK5RAP1Q96SZ6 601 aaKnown RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 RTFDC1Q9BY42 306 aaPredicted RBP3.24□□□□□ -1.89
COPS3-213ENST00000577210 ING3Q9NXR8 418 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 FAM30AQ9NZY2 134 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 TRPS1Q9UHF7 1281 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 TUBD1Q9UJT1 453 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 IPPQ9Y573 584 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 PAXBP1Q9Y5B6 917 aa3.24□□□□□ -1.89
COPS3-213ENST00000577210 GOLGA6L6A8MZA4 724 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 FAM227AF5H4B4 570 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 H3BML4 177 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 HOXA3O43365 443 aaPredicted RBP3.23□□□□□ -1.89
COPS3-213ENST00000577210 PRC1O43663 620 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 GPR32O75388 356 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 ZRANB2O95218 330 aaKnown RBP eCLIP3.23□□□□□ -1.89
COPS3-213ENST00000577210 ANXA1P04083 346 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 SYN1P17600 705 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 COMTP21964 271 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 CACNB3P54284 484 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 GPSM2P81274 684 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 PPP3CAQ08209 521 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 ODF1Q14990 250 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 TBC1D10BQ4KMP7 808 aaPredicted RBP3.23□□□□□ -1.89
COPS3-213ENST00000577210 OTUD7BQ6GQQ9 843 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 PPP4R4Q6NUP7 873 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 DRICH1Q6PGQ1 229 aaPredicted RBP3.23□□□□□ -1.89
COPS3-213ENST00000577210 DENND1CQ8IV53 801 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 WDR75Q8IWA0 830 aaKnown RBP3.23□□□□□ -1.89
COPS3-213ENST00000577210 PRR18Q8N4B5 295 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 CHST13Q8NET6 341 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 CXorf38Q8TB03 319 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 SLC35G2Q8TBE7 412 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 FBXO41Q8TF61 875 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 CFHR4Q92496 578 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 HOXB13Q92826 284 aaPredicted RBP3.23□□□□□ -1.89
COPS3-213ENST00000577210 RGMAQ96B86 450 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 MIEF2Q96C03 454 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 OR14A2Q96R54 314 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 GPHA2Q96T91 129 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 PLA2G12BQ9BX93 195 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 SIK2Q9H0K1 926 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 PRDM12Q9H4Q4 367 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 WDCPQ9H6R7 721 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 CNNM1Q9NRU3 951 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 SIDT1Q9NXL6 827 aaKnown RBP3.23□□□□□ -1.89
COPS3-213ENST00000577210 PLA2G3Q9NZ20 509 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 HECAQ9UBI9 543 aaPredicted RBP3.23□□□□□ -1.89
COPS3-213ENST00000577210 PTPN22Q9Y2R2 807 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 TCAF1Q9Y4C2 921 aa3.23□□□□□ -1.89
COPS3-213ENST00000577210 MYBBP1AQ9BQG0 1328 aaKnown RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 DIRC3C9JPN6 131 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 K7ESM1 405 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 AP1G1O43747 822 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 PLIN1O60240 522 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 AMHP03971 560 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 ITGB3P05106 788 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 KRT18P05783 430 aaKnown RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 GNAI3P08754 354 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 SPATA31D3P0C874 917 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 RPL17P18621 184 aaKnown RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 ATP5JP18859 108 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 DDCP20711 480 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 LPOP22079 712 aaPredicted RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 GUCY1A2P33402 732 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 CASRP41180 1078 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 FXR1P51114 621 aaKnown RBP eCLIP3.22□□□□□ -1.89
COPS3-213ENST00000577210 CLRN1P58418 232 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 CTXN1P60606 82 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 GNAI1P63096 354 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 ADAM8P78325 824 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 MXRA7P84157 204 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms