RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FAM160A1Q05DH4 1040 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 STK4Q13043 487 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 POSTNQ15063 836 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 EPC2Q52LR7 807 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 FAM26FQ5R3K3 315 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 MPZL3Q6UWV2 235 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 UNC13DQ70J99 1090 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 EPM2AIP1Q7L775 607 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF720Q7Z2F6 126 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 MRPL10Q7Z7H8 261 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 THNSL1Q8IYQ7 743 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 CMTR2Q8IYT2 770 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 MICALL1Q8N3F8 863 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 FIBCD1Q8N539 461 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 KCTD17Q8N5Z5 321 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 COLGALT1Q8NBJ5 622 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 HASPINQ8TF76 798 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 SCFD1Q8WVM8 642 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 SAAL1Q96ER3 474 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 PRIMPOLQ96LW4 560 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 ZMAT2Q96NC0 199 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 CDX2Q99626 313 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 CBWD1Q9BRT8 395 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 NTPCRQ9BSD7 190 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 TRAIPQ9BWF2 469 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 VN1R3Q9BXE9 311 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 TRIM6Q9C030 488 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 RBSNQ9H1K0 784 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 CUEDC2Q9H467 287 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 PCIF1Q9H4Z3 704 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 TMEM134Q9H6X4 195 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 NRDE2Q9H7Z3 1164 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 C17orf75Q9HAS0 396 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 SLC28A3Q9HAS3 691 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 ALG13Q9NP73 1137 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 MTMR10Q9NXD2 777 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 DACT1Q9NYF0 836 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 LARSQ9P2J5 1176 aaKnown RBP8.66□□□□□ -1.02
CCDC40-215ENST00000576033 PARP2Q9UGN5 583 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 MAPK8IP1Q9UQF2 711 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 TNFSF13BQ9Y275 285 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 PLXNA3P51805 1871 aa8.66□□□□□ -1.02
CCDC40-215ENST00000576033 GOLGA6L4A6NEF3 574 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 CASTOR2A6NHX0 329 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 GTPBP6O43824 516 aaPredicted RBP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 ITGB1P05556 798 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 STAG3L1P0CL83 205 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 GAP43P17677 238 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 AXLP30530 894 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 IRS1P35568 1242 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 MATR3P43243 847 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 SLC11A1P49279 550 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 ACOT2P49753 483 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 LIG4P49917 911 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 SMTNP53814 917 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 SOX4Q06945 474 aaPredicted RBP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 STRN3Q13033 797 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 NOLC1Q14978 699 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 NAB2Q15742 525 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 CAMK4Q16566 473 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 NOMO2Q5JPE7 1267 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 SPOUT1Q5T280 376 aaKnown RBP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 CNNM4Q6P4Q7 775 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 CCDC65Q8IXS2 484 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF710Q8N1W2 664 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 LRRC43Q8N309 656 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 NOC3LQ8WTT2 800 aaKnown RBP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 C18orf25Q96B23 403 aaPredicted RBP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 B3GALT6Q96L58 329 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 SNX27Q96L92 541 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 TMEM117Q9H0C3 514 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 NUP62CLQ9H1M0 184 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 ELAC1Q9H777 363 aaKnown RBP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 OLFML3Q9NRN5 406 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 EXOC1Q9NV70 894 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 MARCH5Q9NX47 278 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 TUBGCP4Q9UGJ1 667 aa8.65□□□□□ -1.02
CCDC40-215ENST00000576033 PRG3Q9Y2Y8 225 aaPredicted RBP8.65□□□□□ -1.02
CCDC40-215ENST00000576033 PTPRJQ12913 1337 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-215ENST00000576033 BIN1O00499 593 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 PPEF2O14830 753 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 CLIC2O15247 247 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 TGFB1I1O43294 461 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 ZNF623O75123 536 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 PIGRP01833 764 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 BMP6P22004 513 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 RAB27AP51159 221 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 ERVK-21P61565 698 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 MCL1Q07820 350 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 CAMK1Q14012 370 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 ENOX2Q16206 610 aaKnown RBP8.64□□□□□ -1.03
CCDC40-215ENST00000576033 LMBRD2Q68DH5 695 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-215ENST00000576033 GLB1LQ6UWU2 654 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 CRELD2Q6UXH1 353 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-215ENST00000576033 ABI1Q8IZP0 508 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 KLHL23Q8NBE8 558 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 FBXO22Q8NEZ5 403 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 FEZF2Q8TBJ5 459 aa8.64□□□□□ -1.03
CCDC40-215ENST00000576033 AUTS2Q8WXX7 1259 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms