RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TBCKQ8TEA7 893 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 GMLQ99445 158 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 NDNQ99608 321 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 ZC3H12CQ9C0D7 883 aaKnown RBP10.23□□□□□ -0.77
CCDC40-212ENST00000574799 DCLRE1BQ9H816 532 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 NR2E1Q9Y466 385 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 WDR81Q562E7 1941 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 LOC285556D6RIA3 1793 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 MAGEA13PA6NCF6 341 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 CREB1P16220 341 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 ZNF543Q08ER8 600 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 AUHQ13825 339 aaKnown RBP10.23□□□□□ -0.77
CCDC40-212ENST00000574799 DHX34Q14147 1143 aaKnown RBP10.23□□□□□ -0.77
CCDC40-212ENST00000574799 CCDC174Q6PII3 467 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 EPM2AIP1Q7L775 607 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-212ENST00000574799 PODNQ7Z5L7 613 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 EXOC3L1Q86VI1 746 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 SYN2Q92777 582 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-212ENST00000574799 COA7Q96BR5 231 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 TBC1D10AQ9BXI6 508 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 SERPINA10Q9UK55 444 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 PITPNM2Q9BZ72 1349 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 PVALEFA0A1B0GWK0 134 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 CFAP69A5D8W1 941 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 HNRNPCP07910 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 NUDT17P0C025 328 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 TPBGLP0DKB5 382 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 TROVE2P10155 538 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 ETS2P15036 469 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 ADCY8P40145 1251 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 MKRN3Q13064 507 aaKnown RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 ASTE1Q2TB18 679 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 OLFML2BQ68BL8 750 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 MTHFD1LQ6UB35 978 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 SCG3Q8WXD2 468 aaKnown RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 CARD9Q9H257 536 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 CTNNAL1Q9UBT7 734 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 ATF5Q9Y2D1 282 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 ECEL1O95672 775 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 GH1P01241 217 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 UCHL3P15374 230 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 CA4P22748 312 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 RXRBP28702 533 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 LBRQ14739 615 aaKnown RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 KYNUQ16719 465 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 SUPT20HQ8NEM7 779 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 SLC35G2Q8TBE7 412 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 GJA10Q969M2 543 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 GRAMD1AQ96CP6 724 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 TTC1Q99614 292 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 NUDT12Q9BQG2 462 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 NMRK1Q9NWW6 199 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 GALNT8Q9NY28 637 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 A0A0G2JND7 137 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 RIPK2O43353 540 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 CIB2O75838 187 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 AFPP02771 609 aaKnown RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 CETN2P41208 172 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 PTENP60484 403 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 TBC1D25Q3MII6 688 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 GSTA5Q7RTV2 222 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 REXO1Q8N1G1 1221 aaKnown RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 ARHGAP18Q8N392 663 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 SNRNP27Q8WVK2 155 aaKnown RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 MKL1Q969V6 931 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 PRMT6Q96LA8 375 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-212ENST00000574799 KIAA1683Q9H0B3 1180 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 GCNT4Q9P109 453 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 LCTP09848 1927 aa10.22□□□□□ -0.77
CCDC40-212ENST00000574799 ESYT2A0FGR8 921 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 CES2O00748 559 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 ALADP13716 330 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 CHRNA3P32297 505 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 COASYQ13057 564 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 GPBP1Q86WP2 473 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 MYLK4Q86YV6 388 aaPredicted RBP10.21□□□□□ -0.77
CCDC40-212ENST00000574799 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCDC40-212ENST00000574799 ST13P4Q8IZP2 240 aaPredicted RBP10.21□□□□□ -0.77
CCDC40-212ENST00000574799 HAS1Q92839 578 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCDC40-212ENST00000574799 TMEM59LQ9UK28 342 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 CHMP2BQ9UQN3 213 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 E7ENQ6 273 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 LRRN2O75325 713 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 MYBP10242 640 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 ACADSP16219 412 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 SLC16A2P36021 539 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 GJC1P36383 396 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 RPL21P46778 160 aaKnown RBP10.21□□□□□ -0.77
CCDC40-212ENST00000574799 BICD1Q96G01 975 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 PLVAPQ9BX97 442 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 LMCD1Q9NZU5 365 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 PDP2Q9P2J9 529 aa10.21□□□□□ -0.77
CCDC40-212ENST00000574799 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.21□□□□□ -0.77
CCDC40-212ENST00000574799 COL11A1P12107 1806 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms