RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SELPP16109 830 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 CAPN2P17655 700 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 KCNH2Q12809 1159 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 PAK2Q13177 524 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 TMEM192Q8IY95 271 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 ERVK-5Q9HDB9 667 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 PADI3Q9ULW8 664 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 UMODL1Q5DID0 1318 aa26.14■■□□□ 1.78
ATPAF1-213ENST00000574428 GPR182O15218 404 aa26.14■■□□□ 1.78
ATPAF1-213ENST00000574428 WNT7BP56706 349 aa26.14■■□□□ 1.78
ATPAF1-213ENST00000574428 CPSF3Q9UKF6 684 aaKnown RBP26.14■■□□□ 1.78
ATPAF1-213ENST00000574428 HSP90AA2PQ14568 343 aaPredicted RBP26.13■■□□□ 1.77
ATPAF1-213ENST00000574428 DCAF4L1Q3SXM0 396 aa26.13■■□□□ 1.77
ATPAF1-213ENST00000574428 MMRN2Q9H8L6 949 aa26.13■■□□□ 1.77
ATPAF1-213ENST00000574428 PITPNM1O00562 1244 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 AFPP02771 609 aaKnown RBP26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 PPP2R3AQ06190 1150 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 C1orf220Q5T0J3 134 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 HIPK3Q9H422 1215 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 STAG3L1P0CL83 205 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 UBXN11Q5T124 520 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 FKBP15Q5T1M5 1219 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 TWF2Q6IBS0 349 aaKnown RBP26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 APBB1IPQ7Z5R6 666 aaPredicted RBP26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 BRSK2Q8IWQ3 736 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 DRC7Q8IY82 874 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 USP38Q8NB14 1042 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 PARD3BQ8TEW8 1205 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 POP1Q99575 1024 aaKnown RBP26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 TRIM6Q9C030 488 aaPredicted RBP26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 PDE11AQ9HCR9 933 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 SQORQ9Y6N5 450 aa26.12■■□□□ 1.77
ATPAF1-213ENST00000574428 LRRIQ3A6PVS8 624 aaPredicted RBP26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 DLATP10515 647 aaKnown RBP26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 CDC25BP30305 580 aa26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 PSMD6Q15008 389 aa26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 ENOX2Q16206 610 aaKnown RBP26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 SPC24Q8NBT2 197 aa26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 TMC2Q8TDI7 906 aa26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 CCDC51Q96ER9 411 aa26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 PPP1R12CQ9BZL4 782 aa26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 TOPORSQ9NS56 1045 aaPredicted RBP26.11■■□□□ 1.77
ATPAF1-213ENST00000574428 CXCL8P10145 99 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 VSTM4Q8IW00 320 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 FAM212AQ96EL1 285 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 TMX1Q9H3N1 280 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 NXF3Q9H4D5 531 aaKnown RBP26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 HES2Q9Y543 173 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 CLTAP09496 248 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 PBX1P40424 430 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 PPP3CAQ08209 521 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 FAM84AQ96KN4 292 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 CHST12Q9NRB3 414 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 TBX21Q9UL17 535 aa26.1■■□□□ 1.77
ATPAF1-213ENST00000574428 CLTBP09497 229 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 GRM5P41594 1212 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 GCLMP48507 274 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 FMO5P49326 533 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 MCCD1P59942 119 aaPredicted RBP26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 CBWD6Q4V339 395 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 CBWD3Q5JTY5 395 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 CBWD5Q5RIA9 395 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 TMC6Q7Z403 805 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 UBE2Q1Q7Z7E8 422 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 IFIH1Q9BYX4 1025 aaKnown RBP26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 RPF1Q9H9Y2 349 aaKnown RBP26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 TMEM39AQ9NV64 488 aa26.09■■□□□ 1.77
ATPAF1-213ENST00000574428 TANC1Q9C0D5 1861 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 MEFVO15553 781 aaPredicted RBP26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 MGEA5O60502 916 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 NBNO60934 754 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 CCL23P55773 120 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 SYCP1Q15431 976 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 KYAT1Q16773 422 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 LMBRD2Q68DH5 695 aaPredicted RBP26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 USP37Q86T82 979 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 FNBP1Q96RU3 617 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 WNT8AQ9H1J5 351 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 SNTG2Q9NY99 539 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 PTPRJQ12913 1337 aa26.08■■□□□ 1.77
ATPAF1-213ENST00000574428 ZSCAN20P17040 1043 aaPredicted RBP26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 CYP2C18P33260 490 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 KLK7P49862 253 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 GPNMBQ14956 572 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 SCLYQ96I15 445 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 ACAP3Q96P50 834 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 CRACR2AQ9BSW2 395 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 CCDC94Q9BW85 323 aaPredicted RBP26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 APOL6Q9BWW8 343 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 ENPEPQ07075 957 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 DSC3Q14574 896 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 ERGIC2Q96RQ1 377 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 IPPQ9Y573 584 aa26.07■■□□□ 1.76
ATPAF1-213ENST00000574428 TNNI1P19237 187 aa26.06■■□□□ 1.76
ATPAF1-213ENST00000574428 MYL7Q01449 175 aa26.06■■□□□ 1.76
ATPAF1-213ENST00000574428 SLC10A6Q3KNW5 377 aa26.06■■□□□ 1.76
ATPAF1-213ENST00000574428 SPECC1LQ69YQ0 1117 aa26.06■■□□□ 1.76
ATPAF1-213ENST00000574428 SMG8Q8ND04 991 aaKnown RBP26.06■■□□□ 1.76
ATPAF1-213ENST00000574428 CGRRF1Q99675 332 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms