RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 NT5DC1Q5TFE4 455 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 KCNK18Q7Z418 384 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 SLC22A17Q8WUG5 538 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 AUTS2Q8WXX7 1259 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 KHSRPQ92945 711 aaKnown RBP eCLIP18.13■□□□□ 0.49
TVP23B-207ENST00000574294 PNMA5Q96PV4 448 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 KIFC3Q9BVG8 833 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 CHST7Q9NS84 486 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 SNTG2Q9NY99 539 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 KLK14Q9P0G3 267 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 ODF2LQ9ULJ1 636 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 NR2E1Q9Y466 385 aa18.13■□□□□ 0.49
TVP23B-207ENST00000574294 TTLL13PA6NNM8 815 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 K7ELQ4 463 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-207ENST00000574294 ABCD1P33897 745 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 YARSP54577 528 aaKnown RBP18.12■□□□□ 0.49
TVP23B-207ENST00000574294 SLC12A3P55017 1021 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 DSG1Q02413 1049 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 ELAVL2Q12926 359 aaKnown RBP18.12■□□□□ 0.49
TVP23B-207ENST00000574294 STRN3Q13033 797 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 MAPK7Q13164 816 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 HSP90AA2PQ14568 343 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-207ENST00000574294 SF3A1Q15459 793 aaKnown RBP18.12■□□□□ 0.49
TVP23B-207ENST00000574294 RNF135Q8IUD6 432 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 KCNN1Q92952 543 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 KLHL5Q96PQ7 755 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 ACO2Q99798 780 aaKnown RBP18.12■□□□□ 0.49
TVP23B-207ENST00000574294 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-207ENST00000574294 SFXN1Q9H9B4 322 aa18.12■□□□□ 0.49
TVP23B-207ENST00000574294 SF3B1O75533 1304 aaKnown RBP eCLIP18.12■□□□□ 0.49
TVP23B-207ENST00000574294 PRR33A8MZF0 331 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 TADA2AO75478 443 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 CNPP09543 421 aaKnown RBP18.11■□□□□ 0.49
TVP23B-207ENST00000574294 MCF2P10911 925 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 SYT1P21579 422 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 ATAT1Q5SQI0 421 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 KIAA0319Q5VV43 1072 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 EEF1DP3Q658K8 133 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 FUT10Q6P4F1 479 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 PDXDC1Q6P996 788 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 CYP26C1Q6V0L0 522 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 RASSF8Q8NHQ8 419 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 HDAC7Q8WUI4 952 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 FBXL18Q96ME1 805 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 UROC1Q96N76 676 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 LRFN3Q9BTN0 628 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 CCSER1Q9C0I3 900 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 ZSCAN16Q9H4T2 348 aaPredicted RBP18.11■□□□□ 0.49
TVP23B-207ENST00000574294 RXFP1Q9HBX9 757 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 POLD4Q9HCU8 107 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 FNIP2Q9P278 1114 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 C5orf42Q9H799 3197 aa18.11■□□□□ 0.49
TVP23B-207ENST00000574294 PTGESO14684 152 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 BRD1O95696 1058 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 COL9A1P20849 921 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 GRM5P41594 1212 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 CLCN4P51793 760 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 ZNF568Q3ZCX4 644 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 ZPBP2Q6X784 338 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 RPGRIP1Q96KN7 1286 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 TCHPQ9BT92 498 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 PTPRHQ9HD43 1115 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 SLC38A7Q9NVC3 462 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 GDAQ9Y2T3 454 aa18.1■□□□□ 0.49
TVP23B-207ENST00000574294 ARIH1Q9Y4X5 557 aaPredicted RBP18.1■□□□□ 0.49
TVP23B-207ENST00000574294 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.1■□□□□ 0.49
TVP23B-207ENST00000574294 MORC2Q9Y6X9 1032 aaPredicted RBP18.1■□□□□ 0.49
TVP23B-207ENST00000574294 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 SLC16A4O15374 487 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 TOM1L1O75674 476 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 EDN1P05305 212 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 EPCAMP16422 314 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 PROZP22891 400 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 MPZL3Q6UWV2 235 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 C15orf39Q6ZRI6 1047 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 TMEM161BQ8NDZ6 487 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 SNX21Q969T3 373 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 PLIN2Q99541 437 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 RHOBTB2Q9BYZ6 727 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 PLEKHA4Q9H4M7 779 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 CCDC39Q9UFE4 941 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 USTQ9Y2C2 406 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 CITO14578 2027 aa18.09■□□□□ 0.49
TVP23B-207ENST00000574294 TRIP11Q15643 1979 aa18.08■□□□□ 0.49
TVP23B-207ENST00000574294 TMEM189-UBE2V1I3L0A0 370 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 C2CD2LO14523 706 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 TEX28O15482 410 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 TRAPPC3O43617 180 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 GLUD1P00367 558 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 TXLNAP40222 546 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 RAD51AP2Q09MP3 1159 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 KYAT1Q16773 422 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 RARS2Q5T160 578 aaKnown RBP18.08■□□□□ 0.48
TVP23B-207ENST00000574294 TAS1R3Q7RTX0 852 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 TAS1R1Q7RTX1 841 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 GPBP1Q86WP2 473 aa18.08■□□□□ 0.48
TVP23B-207ENST00000574294 CMASQ8NFW8 434 aaPredicted RBP18.08■□□□□ 0.48
TVP23B-207ENST00000574294 DDX27Q96GQ7 796 aaKnown RBP18.08■□□□□ 0.48
TVP23B-207ENST00000574294 PPP1R10Q96QC0 940 aaKnown RBP18.08■□□□□ 0.48
TVP23B-207ENST00000574294 TARS2Q9BW92 718 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms