RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 KCNK18Q7Z418 384 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 SLC22A17Q8WUG5 538 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 AUTS2Q8WXX7 1259 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 KHSRPQ92945 711 aaKnown RBP eCLIP18.13■□□□□ 0.49
TVP23B-206ENST00000574226 PNMA5Q96PV4 448 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 KIFC3Q9BVG8 833 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 CHST7Q9NS84 486 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 SNTG2Q9NY99 539 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 KLK14Q9P0G3 267 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 ODF2LQ9ULJ1 636 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 NR2E1Q9Y466 385 aa18.13■□□□□ 0.49
TVP23B-206ENST00000574226 TTLL13PA6NNM8 815 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 K7ELQ4 463 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-206ENST00000574226 ABCD1P33897 745 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 YARSP54577 528 aaKnown RBP18.12■□□□□ 0.49
TVP23B-206ENST00000574226 SLC12A3P55017 1021 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 DSG1Q02413 1049 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 ELAVL2Q12926 359 aaKnown RBP18.12■□□□□ 0.49
TVP23B-206ENST00000574226 STRN3Q13033 797 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 MAPK7Q13164 816 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 HSP90AA2PQ14568 343 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-206ENST00000574226 SF3A1Q15459 793 aaKnown RBP18.12■□□□□ 0.49
TVP23B-206ENST00000574226 RNF135Q8IUD6 432 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 KCNN1Q92952 543 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 KLHL5Q96PQ7 755 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 ACO2Q99798 780 aaKnown RBP18.12■□□□□ 0.49
TVP23B-206ENST00000574226 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-206ENST00000574226 SFXN1Q9H9B4 322 aa18.12■□□□□ 0.49
TVP23B-206ENST00000574226 SF3B1O75533 1304 aaKnown RBP eCLIP18.12■□□□□ 0.49
TVP23B-206ENST00000574226 PRR33A8MZF0 331 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 TADA2AO75478 443 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 CNPP09543 421 aaKnown RBP18.11■□□□□ 0.49
TVP23B-206ENST00000574226 MCF2P10911 925 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 SYT1P21579 422 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 ATAT1Q5SQI0 421 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 KIAA0319Q5VV43 1072 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 EEF1DP3Q658K8 133 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 FUT10Q6P4F1 479 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 PDXDC1Q6P996 788 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 CYP26C1Q6V0L0 522 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 RASSF8Q8NHQ8 419 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 HDAC7Q8WUI4 952 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 FBXL18Q96ME1 805 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 UROC1Q96N76 676 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 LRFN3Q9BTN0 628 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 CCSER1Q9C0I3 900 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 ZSCAN16Q9H4T2 348 aaPredicted RBP18.11■□□□□ 0.49
TVP23B-206ENST00000574226 RXFP1Q9HBX9 757 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 POLD4Q9HCU8 107 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 FNIP2Q9P278 1114 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 C5orf42Q9H799 3197 aa18.11■□□□□ 0.49
TVP23B-206ENST00000574226 PTGESO14684 152 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 BRD1O95696 1058 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 COL9A1P20849 921 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 GRM5P41594 1212 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 CLCN4P51793 760 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 ZNF568Q3ZCX4 644 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 ZPBP2Q6X784 338 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 RPGRIP1Q96KN7 1286 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 TCHPQ9BT92 498 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 PTPRHQ9HD43 1115 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 SLC38A7Q9NVC3 462 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 GDAQ9Y2T3 454 aa18.1■□□□□ 0.49
TVP23B-206ENST00000574226 ARIH1Q9Y4X5 557 aaPredicted RBP18.1■□□□□ 0.49
TVP23B-206ENST00000574226 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.1■□□□□ 0.49
TVP23B-206ENST00000574226 MORC2Q9Y6X9 1032 aaPredicted RBP18.1■□□□□ 0.49
TVP23B-206ENST00000574226 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 SLC16A4O15374 487 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 TOM1L1O75674 476 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 EDN1P05305 212 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 EPCAMP16422 314 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 PROZP22891 400 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 MPZL3Q6UWV2 235 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 C15orf39Q6ZRI6 1047 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 TMEM161BQ8NDZ6 487 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 SNX21Q969T3 373 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 PLIN2Q99541 437 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 RHOBTB2Q9BYZ6 727 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 PLEKHA4Q9H4M7 779 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 CCDC39Q9UFE4 941 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 USTQ9Y2C2 406 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 CITO14578 2027 aa18.09■□□□□ 0.49
TVP23B-206ENST00000574226 TRIP11Q15643 1979 aa18.08■□□□□ 0.49
TVP23B-206ENST00000574226 TMEM189-UBE2V1I3L0A0 370 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 C2CD2LO14523 706 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 TEX28O15482 410 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 TRAPPC3O43617 180 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 GLUD1P00367 558 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 TXLNAP40222 546 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 RAD51AP2Q09MP3 1159 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 KYAT1Q16773 422 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 RARS2Q5T160 578 aaKnown RBP18.08■□□□□ 0.48
TVP23B-206ENST00000574226 TAS1R3Q7RTX0 852 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 TAS1R1Q7RTX1 841 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 GPBP1Q86WP2 473 aa18.08■□□□□ 0.48
TVP23B-206ENST00000574226 CMASQ8NFW8 434 aaPredicted RBP18.08■□□□□ 0.48
TVP23B-206ENST00000574226 DDX27Q96GQ7 796 aaKnown RBP18.08■□□□□ 0.48
TVP23B-206ENST00000574226 PPP1R10Q96QC0 940 aaKnown RBP18.08■□□□□ 0.48
TVP23B-206ENST00000574226 TARS2Q9BW92 718 aaKnown RBP18.08■□□□□ 0.48
TVP23B-206ENST00000574226 APOL5Q9BWW9 433 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms