RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 DHX8Q14562 1220 aaKnown RBP13.02□□□□□ -0.33
NDE1-206ENST00000572967 PPP2R5AQ15172 486 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 ECM1Q16610 540 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.33
NDE1-206ENST00000572967 STXBP4Q6ZWJ1 553 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 VPS52Q8N1B4 723 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 PGBD4Q96DM1 585 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 PAGE5Q96GU1 130 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 C7orf25Q9BPX7 421 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 APOL6Q9BWW8 343 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 TRIM9Q9C026 710 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 ZBP1Q9H171 429 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 C17orf75Q9HAS0 396 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.33
NDE1-206ENST00000572967 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 IPPQ9Y573 584 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 PHLPP2Q6ZVD8 1323 aa13.02□□□□□ -0.33
NDE1-206ENST00000572967 PVALEFA0A1B0GWK0 134 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 C2orf71A6NGG8 1288 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 H0YCG3 227 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 B4GALT5O43286 388 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 FAM13AO94988 1023 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 POMCP01189 267 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 MLH1P40692 756 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 AFMP43652 599 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 AFF1P51825 1210 aaKnown RBP13.01□□□□□ -0.33
NDE1-206ENST00000572967 PTENP60484 403 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 MXD4Q14582 209 aaPredicted RBP13.01□□□□□ -0.33
NDE1-206ENST00000572967 RINT1Q6NUQ1 792 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 ANKRD54Q6NXT1 300 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 NOTUMQ6P988 496 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 KCNK18Q7Z418 384 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 CDR2LQ86X02 465 aaPredicted RBP13.01□□□□□ -0.33
NDE1-206ENST00000572967 ZNF280BQ86YH2 543 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
NDE1-206ENST00000572967 IFT74Q96LB3 600 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 GSDMAQ96QA5 445 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 NXF3Q9H4D5 531 aaKnown RBP13.01□□□□□ -0.33
NDE1-206ENST00000572967 EXOC1Q9NV70 894 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 LARSQ9P2J5 1176 aaKnown RBP13.01□□□□□ -0.33
NDE1-206ENST00000572967 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 HCN4Q9Y3Q4 1203 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 HES2Q9Y543 173 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 CNTNAP2Q9UHC6 1331 aa13.01□□□□□ -0.33
NDE1-206ENST00000572967 MYH11P35749 1972 aa13□□□□□ -0.33
NDE1-206ENST00000572967 ASAP2O43150 1006 aa13□□□□□ -0.33
NDE1-206ENST00000572967 ZNF623O75123 536 aa13□□□□□ -0.33
NDE1-206ENST00000572967 DDHD2O94830 711 aa13□□□□□ -0.33
NDE1-206ENST00000572967 KIF20AO95235 890 aa13□□□□□ -0.33
NDE1-206ENST00000572967 GALTP07902 379 aa13□□□□□ -0.33
NDE1-206ENST00000572967 ALADP13716 330 aa13□□□□□ -0.33
NDE1-206ENST00000572967 IDEP14735 1019 aa13□□□□□ -0.33
NDE1-206ENST00000572967 ARF4P18085 180 aaPredicted RBP13□□□□□ -0.33
NDE1-206ENST00000572967 PPP1R2P41236 205 aa13□□□□□ -0.33
NDE1-206ENST00000572967 KCNC3Q14003 757 aa13□□□□□ -0.33
NDE1-206ENST00000572967 UNC13DQ70J99 1090 aa13□□□□□ -0.33
NDE1-206ENST00000572967 RSPH1Q8WYR4 309 aa13□□□□□ -0.33
NDE1-206ENST00000572967 DDX12PQ92771 950 aa13□□□□□ -0.33
NDE1-206ENST00000572967 IGSF21Q96ID5 467 aa13□□□□□ -0.33
NDE1-206ENST00000572967 FAM193BQ96PV7 902 aaPredicted RBP13□□□□□ -0.33
NDE1-206ENST00000572967 VN1R3Q9BXE9 311 aa13□□□□□ -0.33
NDE1-206ENST00000572967 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
NDE1-206ENST00000572967 PARVGQ9HBI0 331 aa13□□□□□ -0.33
NDE1-206ENST00000572967 PRG3Q9Y2Y8 225 aaPredicted RBP13□□□□□ -0.33
NDE1-206ENST00000572967 HCFC2Q9Y5Z7 792 aa13□□□□□ -0.33
NDE1-206ENST00000572967 KMT2EQ8IZD2 1858 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 GPR37L1O60883 481 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 CLASP2O75122 1294 aaKnown RBP12.99□□□□□ -0.33
NDE1-206ENST00000572967 NPTXRO95502 500 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 ITGA4P13612 1032 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 ARL2P36404 184 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 SCNN1GP51170 649 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 SMTNP53814 917 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 PSMD2Q13200 908 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 DMP1Q13316 513 aaPredicted RBP12.99□□□□□ -0.33
NDE1-206ENST00000572967 ALCAMQ13740 583 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 KCNB1Q14721 858 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 CBX2Q14781 532 aaPredicted RBP12.99□□□□□ -0.33
NDE1-206ENST00000572967 AMHR2Q16671 573 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 SYCE2Q6PIF2 218 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 C1orf186Q6ZWK4 172 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
NDE1-206ENST00000572967 RNF135Q8IUD6 432 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 BSNDQ8WZ55 320 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 SUSD6Q92537 303 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 CASP10Q92851 521 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 RPGRIP1Q96KN7 1286 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 ZFP42Q96MM3 310 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 GAD1Q99259 594 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 RUSC1Q9BVN2 902 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 DACH1Q9UI36 760 aa12.99□□□□□ -0.33
NDE1-206ENST00000572967 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
NDE1-206ENST00000572967 MYMKA6NI61 221 aa12.98□□□□□ -0.33
NDE1-206ENST00000572967 PRR33A8MZF0 331 aa12.98□□□□□ -0.33
NDE1-206ENST00000572967 RPN1P04843 607 aaKnown RBP12.98□□□□□ -0.33
NDE1-206ENST00000572967 WEE2P0C1S8 567 aa12.98□□□□□ -0.33
NDE1-206ENST00000572967 CTSAP10619 480 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms