RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MFSD14AQ96MC6 490 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF830Q96NB3 372 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 NOX5Q96PH1 765 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 PHF20Q9BVI0 1012 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 EIF2AQ9BY44 585 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 NT5C3AQ9H0P0 336 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 TNMDQ9H2S6 317 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 VPS37BQ9H9H4 285 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 ERVK-5Q9HDB9 667 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 MCM9Q9NXL9 1143 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 MYO1AQ9UBC5 1043 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 EXTL2Q9UBQ6 330 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 UBA2Q9UBT2 640 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 CFAP45Q9UL16 551 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 HPCAL4Q9UM19 191 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 NPFFR2Q9Y5X5 522 aa5.51□□□□□ -1.53
TOPBP1-210ENST00000572787 FIGNL2A6NMB9 653 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 TTLL8A6PVC2 850 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 A8MVJ9 347 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ZBTB14O43829 449 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 SEC22BO75396 215 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 BEST1O76090 585 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 UBOX5O94941 541 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 MLYCDO95822 493 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 SNRNP70P08621 437 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 IFNAR1P17181 557 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 EEF1DP29692 281 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 STIP1P31948 543 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 GBP1P32455 592 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 MLH1P40692 756 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 CCR5P51681 352 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 TKTL1P51854 596 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 POLE2P56282 527 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 KCNQ4P56696 695 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ST5P78524 1137 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 MC1RQ01726 317 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 TRIM32Q13049 653 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC14A1Q13336 389 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 MAMLD1Q13495 774 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 FGL2Q14314 439 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ACAP1Q15027 740 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ADIPOQQ15848 244 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ATP2B3Q16720 1220 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 C2orf76Q3KRA6 126 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 PAN2Q504Q3 1202 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 TAF3Q5VWG9 929 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 WDR73Q6P4I2 378 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 LIAT1Q6ZQX7 453 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 EP400NLQ6ZTU2 488 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 COL23A1Q86Y22 540 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 FANCBQ8NB91 859 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 AGBL5Q8NDL9 886 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 DENND6BQ8NEG7 585 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ADCY4Q8NFM4 1077 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ETNPPLQ8TBG4 499 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 OTUD7AQ8TE49 926 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ANKRD49Q8WVL7 239 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 AUTS2Q8WXX7 1259 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 EID2BQ96D98 161 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 C18orf8Q96DM3 657 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 BORCS6Q96GS4 357 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 CABS1Q96KC9 395 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 MSLNLQ96KJ4 702 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ZDHHC15Q96MV8 337 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 RUNDC3BQ96NL0 473 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 NEK1Q96PY6 1258 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC2A13Q96QE2 648 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 METTL22Q9BUU2 404 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 PBX4Q9BYU1 374 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 PDCL3Q9H2J4 239 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 NCOR1P1Q9H4R4 102 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 PDE7BQ9NP56 450 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNHIT6Q9NWK9 470 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 GMPR2Q9P2T1 348 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 ZMAT5Q9UDW3 170 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 HOOK1Q9UJC3 728 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 CNPY2Q9Y2B0 182 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 C2CD2Q9Y426 696 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 NR2E3Q9Y5X4 410 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 SQORQ9Y6N5 450 aa5.5□□□□□ -1.53
TOPBP1-210ENST00000572787 A0A1W2PNR3 127 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 CCDC169A6NNP5 214 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 SPATA31C2B4DYI2 1134 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 WNT9AO14904 365 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 ASAP2O43150 1006 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 THAP12O43422 761 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 NEMFO60524 1076 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 NOL3O60936 208 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 PGM3O95394 542 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 TMIGD3P0DMS9 266 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 HSPA1AP0DMV8 641 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 HSPA1BP0DMV9 641 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 CST5P28325 142 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 GRK4P32298 578 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 ARL3P36405 182 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 AFMP43652 599 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 GSK3AP49840 483 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 MXI1P50539 228 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 DNM2P50570 870 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms