RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 IDEP14735 1019 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 ATF7P17544 494 aaPredicted RBP8.55□□□□□ -1.04
SMG6-211ENST00000572369 MAPK7Q13164 816 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 GIT2Q14161 759 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 AMHR2Q16671 573 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 FAM187BQ17R55 369 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 NOMO2Q5JPE7 1267 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 CLLU1OSQ5K130 101 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 ATF7IP2Q5U623 682 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 ZNF598Q86UK7 904 aaKnown RBP8.55□□□□□ -1.04
SMG6-211ENST00000572369 KIAA2013Q8IYS2 634 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 DAW1Q8N136 415 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 MICAL1Q8TDZ2 1067 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 RSPH1Q8WYR4 309 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 CLP1Q92989 425 aaKnown RBP8.55□□□□□ -1.04
SMG6-211ENST00000572369 DHX58Q96C10 678 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 ZNF558Q96NG5 402 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 RPS6KC1Q96S38 1066 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 POP1Q99575 1024 aaKnown RBP8.55□□□□□ -1.04
SMG6-211ENST00000572369 PLVAPQ9BX97 442 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 MRPL4Q9BYD3 311 aaKnown RBP8.55□□□□□ -1.04
SMG6-211ENST00000572369 LRRC27Q9C0I9 530 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 FZD8Q9H461 694 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 TMEM134Q9H6X4 195 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 PARVGQ9HBI0 331 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 UBN1Q9NPG3 1134 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 BLOC1S4Q9NUP1 217 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 KANSL3Q9P2N6 904 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 PCDHA7Q9UN72 937 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 USP20Q9Y2K6 914 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 CEP250Q9BV73 2442 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.54□□□□□ -1.04
SMG6-211ENST00000572369 A0A1B0GUA9 196 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 MEIS3P2A8K0S8 358 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 C5orf67F2Z3F1 127 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 TRAK2O60296 914 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 ZIC2O95409 532 aaPredicted RBP8.54□□□□□ -1.04
SMG6-211ENST00000572369 AKAP5P24588 427 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 CA8P35219 290 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 MLH1P40692 756 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 ALDH7A1P49419 539 aaKnown RBP8.54□□□□□ -1.04
SMG6-211ENST00000572369 AMPD3Q01432 767 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 KRT17Q04695 432 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 DCAF4L1Q3SXM0 396 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 ZNF568Q3ZCX4 644 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 NAALADL2Q58DX5 795 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 ARSHQ5FYA8 562 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 UBXN11Q5T124 520 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 KCNT2Q6UVM3 1135 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 AGMOQ6ZNB7 445 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 EP400NLQ6ZTU2 488 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 HAUS6Q7Z4H7 955 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 MRPL10Q7Z7H8 261 aaKnown RBP8.54□□□□□ -1.04
SMG6-211ENST00000572369 ZBTB33Q86T24 672 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 IQUBQ8NA54 791 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 COLGALT1Q8NBJ5 622 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 SMG8Q8ND04 991 aaKnown RBP8.54□□□□□ -1.04
SMG6-211ENST00000572369 SPIRE2Q8WWL2 714 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 DDX12PQ92771 950 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 P2RX5Q93086 422 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 SCAND2PQ9GZW5 306 aaPredicted RBP8.54□□□□□ -1.04
SMG6-211ENST00000572369 CCDC113Q9H0I3 377 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 LMAN2LQ9H0V9 348 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 NXF3Q9H4D5 531 aaKnown RBP8.54□□□□□ -1.04
SMG6-211ENST00000572369 PDZD7Q9H5P4 517 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 CWH43Q9H720 699 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 RNF19AQ9NV58 838 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 HCSTQ9UBK5 93 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 PUF60Q9UHX1 559 aaKnown RBP8.54□□□□□ -1.04
SMG6-211ENST00000572369 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 ZDHHC9Q9Y397 364 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 HES2Q9Y543 173 aa8.54□□□□□ -1.04
SMG6-211ENST00000572369 ZZEF1O43149 2961 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 BPTFQ12830 3046 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 NAV2Q8IVL1 2488 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 CARNS1A5YM72 827 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 GOLGA6L4A6NEF3 574 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 ARL5CA6NH57 179 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 TTLL13PA6NNM8 815 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 NT5C1B-RDH14C9J2C7 533 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 GRM6O15303 877 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 POLR2DO15514 142 aaKnown RBP8.53□□□□□ -1.04
SMG6-211ENST00000572369 NR1I2O75469 434 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 OFD1O75665 1012 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 FGF18O76093 207 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 POMCP01189 267 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 ITGB1P05556 798 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 HARSP12081 509 aaKnown RBP8.53□□□□□ -1.04
SMG6-211ENST00000572369 ABCD1P33897 745 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 PPM1AP35813 382 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 PBX3P40426 434 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 LIG4P49917 911 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 YARSP54577 528 aaKnown RBP8.53□□□□□ -1.04
SMG6-211ENST00000572369 NCKAP1LP55160 1127 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 OSTNP61366 133 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 ZXDAP98168 799 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 TIGD5Q53EQ6 642 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 NT5DC1Q5TFE4 455 aa8.53□□□□□ -1.04
SMG6-211ENST00000572369 SHC4Q6S5L8 630 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms