RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 MMTAG2Q9BU76 263 aaKnown RBP12.53□□□□□ -0.4
LITAF-206ENST00000571277 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
LITAF-206ENST00000571277 RHOBTB2Q9BYZ6 727 aa12.53□□□□□ -0.4
LITAF-206ENST00000571277 MAN1C1Q9NR34 630 aa12.53□□□□□ -0.4
LITAF-206ENST00000571277 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
LITAF-206ENST00000571277 DDX19AQ9NUU7 478 aaKnown RBP12.53□□□□□ -0.4
LITAF-206ENST00000571277 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
LITAF-206ENST00000571277 LIMD1Q9UGP4 676 aa12.53□□□□□ -0.4
LITAF-206ENST00000571277 KIAA1024Q9UPX6 916 aa12.53□□□□□ -0.4
LITAF-206ENST00000571277 SSX2IPQ9Y2D8 614 aa12.53□□□□□ -0.4
LITAF-206ENST00000571277 VWA8A3KMH1 1905 aa12.52□□□□□ -0.4
LITAF-206ENST00000571277 TRIP11Q15643 1979 aa12.52□□□□□ -0.4
LITAF-206ENST00000571277 DOCK8Q8NF50 2099 aa12.52□□□□□ -0.4
LITAF-206ENST00000571277 N4BP1O75113 896 aaKnown RBP12.52□□□□□ -0.41
LITAF-206ENST00000571277 RFPL2O75678 378 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 GLUD1P00367 558 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 C1RP00736 705 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
LITAF-206ENST00000571277 CDC25AP30304 524 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 PRPHP41219 470 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 TUSC3Q13454 348 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 HSP90AA2PQ14568 343 aaPredicted RBP12.52□□□□□ -0.41
LITAF-206ENST00000571277 PPP2R5AQ15172 486 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 RABEP1Q15276 862 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 USP41Q3LFD5 358 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 NT5DC1Q5TFE4 455 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 LILRA6Q6PI73 481 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 KCNK18Q7Z418 384 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 ZBTB33Q86T24 672 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 SUGP1Q8IWZ8 645 aaKnown RBP12.52□□□□□ -0.41
LITAF-206ENST00000571277 UBALD2Q8IYN6 164 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 DEPTORQ8TB45 409 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 SNX29Q8TEQ0 813 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 KIFAP3Q92845 792 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 ZNF707Q96C28 371 aaPredicted RBP12.52□□□□□ -0.41
LITAF-206ENST00000571277 FNIP2Q9P278 1114 aa12.52□□□□□ -0.41
LITAF-206ENST00000571277 E9PMD0 336 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 LAD1O00515 517 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 TGM5O43548 720 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 KIF4AO95239 1232 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 SPATA31D3P0C874 917 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
LITAF-206ENST00000571277 AVPR2P30518 371 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 EFNA5P52803 228 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 TCF15Q12870 199 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 MAPK7Q13164 816 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 SPATA31D4Q6ZUB0 917 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 CCDC149Q6ZUS6 474 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 TAS1R3Q7RTX0 852 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 ALYREFQ86V81 257 aaKnown RBP12.51□□□□□ -0.41
LITAF-206ENST00000571277 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 RIN2Q8WYP3 895 aaPredicted RBP12.51□□□□□ -0.41
LITAF-206ENST00000571277 TMX3Q96JJ7 454 aa12.51□□□□□ -0.41
LITAF-206ENST00000571277 CCDC195A0A1B0GUA6 201 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 CASTOR2A6NHX0 329 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 TADA2AO75478 443 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 THP07101 528 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 MYBP10242 640 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 RPL17P18621 184 aaKnown RBP12.5□□□□□ -0.41
LITAF-206ENST00000571277 LIG1P18858 919 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 NPTX2P47972 431 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 MRE11P49959 708 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 ATP2C1P98194 919 aaPredicted RBP12.5□□□□□ -0.41
LITAF-206ENST00000571277 ATF7IP2Q5U623 682 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 PRSS55Q6UWB4 352 aaPredicted RBP12.5□□□□□ -0.41
LITAF-206ENST00000571277 CYP26C1Q6V0L0 522 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 C1orf186Q6ZWK4 172 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 OTOP3Q7RTS5 596 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 PALB2Q86YC2 1186 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 HASPINQ8TF76 798 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 PIK3R5Q8WYR1 880 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 IFT74Q96LB3 600 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
LITAF-206ENST00000571277 PHOX2BQ99453 314 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 CLSTN3Q9BQT9 956 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 ADPGKQ9BRR6 497 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 RUSC1Q9BVN2 902 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 PLEKHA4Q9H4M7 779 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 PTPRHQ9HD43 1115 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 WDR6Q9NNW5 1121 aaKnown RBP12.5□□□□□ -0.41
LITAF-206ENST00000571277 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.5□□□□□ -0.41
LITAF-206ENST00000571277 ARHGAP28Q9P2N2 729 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 TNFSF13BQ9Y275 285 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 GDAQ9Y2T3 454 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
LITAF-206ENST00000571277 SF3B1O75533 1304 aaKnown RBP eCLIP12.5□□□□□ -0.41
LITAF-206ENST00000571277 DOCK6Q96HP0 2047 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 CLUHO75153 1309 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 K7ERI5 159 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 ABLIM1O14639 778 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 HIP1RO75146 1068 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 PEX3P56589 373 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 DCAF4L1Q3SXM0 396 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 HYIQ5T013 277 aa12.49□□□□□ -0.41
LITAF-206ENST00000571277 KRT79Q5XKE5 535 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms