RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 IRF2BPLQ9H1B7 796 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 PDZD7Q9H5P4 517 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 DPP7Q9UHL4 492 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 PTGESO14684 152 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 EDN1P05305 212 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 OR52Z1P0C646 297 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 RPL17P18621 184 aaKnown RBP16.34■□□□□ 0.21
NDE1-203ENST00000570727 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 ZBTB8OSQ8IWT0 167 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 RSAD2Q8WXG1 361 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 RIN2Q8WYP3 895 aaPredicted RBP16.34■□□□□ 0.21
NDE1-203ENST00000570727 SMG7Q92540 1137 aaKnown RBP16.34■□□□□ 0.21
NDE1-203ENST00000570727 C8orf76Q96K31 380 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 CCDC113Q9H0I3 377 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
NDE1-203ENST00000570727 PLEKHA4Q9H4M7 779 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 POLD4Q9HCU8 107 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.34■□□□□ 0.21
NDE1-203ENST00000570727 SNTG2Q9NY99 539 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 DUSP12Q9UNI6 340 aa16.34■□□□□ 0.21
NDE1-203ENST00000570727 N4BP3O15049 544 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 PI15O43692 258 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 TADA2AO75478 443 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
NDE1-203ENST00000570727 TUSC3Q13454 348 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 PRPF4BQ13523 1007 aaKnown RBP16.33■□□□□ 0.2
NDE1-203ENST00000570727 HSP90AA2PQ14568 343 aaPredicted RBP16.33■□□□□ 0.2
NDE1-203ENST00000570727 NAB2Q15742 525 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 RTP2Q5QGT7 225 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 CWF19L1Q69YN2 538 aaKnown RBP16.33■□□□□ 0.2
NDE1-203ENST00000570727 NOSTRINQ8IVI9 506 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 FBXO18Q8NFZ0 1043 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 MYADMQ96S97 322 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 LLPHQ9BRT6 129 aaKnown RBP16.33■□□□□ 0.2
NDE1-203ENST00000570727 C2orf40Q9H1Z8 148 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 IGSF9Q9P2J2 1179 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 EPS15L1Q9UBC2 864 aa16.33■□□□□ 0.2
NDE1-203ENST00000570727 VWA8A3KMH1 1905 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 ARHGEF35A5YM69 484 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 ACKR2O00590 384 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 NARSO43776 548 aaKnown RBP16.32■□□□□ 0.2
NDE1-203ENST00000570727 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
NDE1-203ENST00000570727 CLUHO75153 1309 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 PRKCBP05771 671 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 MUTP22033 750 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 NAMPTP43490 491 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 MAPK6Q16659 721 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 TTC38Q5R3I4 469 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 EEF1DP3Q658K8 133 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 ELMSAN1Q6PJG2 1045 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 PRSS55Q6UWB4 352 aaPredicted RBP16.32■□□□□ 0.2
NDE1-203ENST00000570727 ERMNQ8TAM6 284 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 CLSTN3Q9BQT9 956 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 PRKD2Q9BZL6 878 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 MFSD1Q9H3U5 465 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 ZDHHC7Q9NXF8 308 aa16.32■□□□□ 0.2
NDE1-203ENST00000570727 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.23e-9■■■■■ 206.8
NDE1-203ENST00000570727 CASTOR2A6NHX0 329 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 PROB1E7EW31 1015 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 ST18O60284 1047 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 ZMYND10O75800 440 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 RECQL4O94761 1208 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 KIF4AO95239 1232 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 THP07101 528 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 IGFBP6P24592 240 aaPredicted RBP16.31■□□□□ 0.2
NDE1-203ENST00000570727 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
NDE1-203ENST00000570727 FXR2P51116 673 aaKnown RBP eCLIP16.31■□□□□ 0.2
NDE1-203ENST00000570727 NBR1Q14596 966 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 NT5DC1Q5TFE4 455 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 SLC44A3Q8N4M1 653 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 FLCNQ8NFG4 579 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 LNX1Q8TBB1 728 aaPredicted RBP16.31■□□□□ 0.2
NDE1-203ENST00000570727 STAMQ92783 540 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 KIF2CQ99661 725 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 KIFC3Q9BVG8 833 aa16.31■□□□□ 0.2
NDE1-203ENST00000570727 PTPRZ1P23471 2315 aaPredicted RBP16.3■□□□□ 0.2
NDE1-203ENST00000570727 GFRA3O60609 400 aa16.3■□□□□ 0.2
NDE1-203ENST00000570727 LIG1P18858 919 aa16.3■□□□□ 0.2
NDE1-203ENST00000570727 AOC1P19801 751 aa16.3■□□□□ 0.2
NDE1-203ENST00000570727 RBM25P49756 843 aaKnown RBP16.3■□□□□ 0.2
NDE1-203ENST00000570727 FAM171A1Q5VUB5 890 aa16.3■□□□□ 0.2
NDE1-203ENST00000570727 SIX5Q8N196 739 aa16.3■□□□□ 0.2
NDE1-203ENST00000570727 PIK3R5Q8WYR1 880 aa16.3■□□□□ 0.2
NDE1-203ENST00000570727 TTPALQ9BTX7 342 aa16.3■□□□□ 0.2
NDE1-203ENST00000570727 PIDD1Q9HB75 910 aa16.3■□□□□ 0.2
NDE1-203ENST00000570727 RIF1Q5UIP0 2472 aaKnown RBP16.29■□□□□ 0.2
NDE1-203ENST00000570727 KRBA1A5PL33 1030 aa16.29■□□□□ 0.2
NDE1-203ENST00000570727 ADAM12O43184 909 aa16.29■□□□□ 0.2
NDE1-203ENST00000570727 LAMP2P13473 410 aa16.29■□□□□ 0.2
NDE1-203ENST00000570727 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
NDE1-203ENST00000570727 TRAPPC10P48553 1259 aa16.29■□□□□ 0.2
NDE1-203ENST00000570727 TOB1P50616 345 aaPredicted RBP16.29■□□□□ 0.2
NDE1-203ENST00000570727 CREMQ03060 361 aa16.29■□□□□ 0.2
NDE1-203ENST00000570727 PDIA5Q14554 519 aa16.29■□□□□ 0.2
NDE1-203ENST00000570727 PPP2R5AQ15172 486 aa16.29■□□□□ 0.2
NDE1-203ENST00000570727 TMEM132AQ24JP5 1023 aa16.29■□□□□ 0.2
NDE1-203ENST00000570727 CD300LGQ6UXG3 332 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms