RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 UMODL1Q5DID0 1318 aa16.77■□□□□ 0.28
HERPUD1-219ENST00000570273 LGALS16A8MUM7 142 aa16.77■□□□□ 0.27
HERPUD1-219ENST00000570273 FAM189A1O60320 539 aa16.77■□□□□ 0.27
HERPUD1-219ENST00000570273 OSTNP61366 133 aa16.77■□□□□ 0.27
HERPUD1-219ENST00000570273 KYAT1Q16773 422 aa16.77■□□□□ 0.27
HERPUD1-219ENST00000570273 VWA3BQ502W6 1294 aa16.77■□□□□ 0.27
HERPUD1-219ENST00000570273 CRELD2Q6UXH1 353 aaPredicted RBP16.77■□□□□ 0.27
HERPUD1-219ENST00000570273 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.27
HERPUD1-219ENST00000570273 EIF2AQ9BY44 585 aaKnown RBP16.77■□□□□ 0.27
HERPUD1-219ENST00000570273 LRRC10BA6NIK2 292 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 CLTAP09496 248 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 TRIM49P0CI25 452 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 TRIM49CP0CI26 452 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 STAG3L1P0CL83 205 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 TNFSF9P41273 254 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 VAMP7P51809 220 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 MIIPQ5JXC2 388 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 UBXN11Q5T124 520 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 USP37Q86T82 979 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 SLC35C1Q96A29 364 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 CCDC127Q96BQ5 260 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 CCDC94Q9BW85 323 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 NDST4Q9H3R1 872 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 PRDM5Q9NQX1 630 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 CHST12Q9NRB3 414 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 CPSF3Q9UKF6 684 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-219ENST00000570273 AFPP02771 609 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 ZSCAN20P17040 1043 aaPredicted RBP16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 CYP2C18P33260 490 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 GRM5P41594 1212 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 CCL23P55773 120 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 PSMD6Q15008 389 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 PLEKHO2Q8TD55 490 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 TMC2Q8TDI7 906 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 FAM212AQ96EL1 285 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 MRFAP1L1Q96HT8 127 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 IFIH1Q9BYX4 1025 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 MMRN2Q9H8L6 949 aa16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-219ENST00000570273 TEX33O43247 280 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 NBNO60934 754 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 CXCL8P10145 99 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 DLATP10515 647 aaKnown RBP16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 UBXN1Q04323 297 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 KCNH2Q12809 1159 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 ENOX2Q16206 610 aaKnown RBP16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 TMEM192Q8IY95 271 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 PARD3BQ8TEW8 1205 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 SCLYQ96I15 445 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 FNBP1Q96RU3 617 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 APOL6Q9BWW8 343 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 WNT8AQ9H1J5 351 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 TMX1Q9H3N1 280 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 TANC1Q9C0D5 1861 aa16.74■□□□□ 0.27
HERPUD1-219ENST00000570273 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 STX10O60499 249 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 PARNO95453 639 aaKnown RBP16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 DLG4P78352 724 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 ENPEPQ07075 957 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 DSC3Q14574 896 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 NR1I3Q14994 352 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 SEPT8Q92599 483 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 ACAP3Q96P50 834 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 CGRRF1Q99675 332 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 PDE11AQ9HCR9 933 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 TOPORSQ9NS56 1045 aaPredicted RBP16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 SNTG2Q9NY99 539 aa16.73■□□□□ 0.27
HERPUD1-219ENST00000570273 MGEA5O60502 916 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 IL18RAPO95256 599 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 CDC25BP30305 580 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 RAB27AP51159 221 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 YARSP54577 528 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 WNT7BP56706 349 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 MYL7Q01449 175 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 SURF1Q15526 300 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 PTPN21Q16825 1174 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 C1orf220Q5T0J3 134 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 LMBRD2Q68DH5 695 aaPredicted RBP16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 HACE1Q8IYU2 909 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 ADAM2Q99965 735 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 FAM105AQ9NUU6 356 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 HES2Q9Y543 173 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 IPPQ9Y573 584 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 PCDHB2Q9Y5E7 798 aa16.72■□□□□ 0.27
HERPUD1-219ENST00000570273 KIAA0355O15063 1070 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 N4BP1O75113 896 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 RECQL4O94761 1208 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 TNNI1P19237 187 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 GCLMP48507 274 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 FMO5P49326 533 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 MXI1P50539 228 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 POU5F1Q01860 360 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 PPP3CAQ08209 521 aa16.71■□□□□ 0.27
HERPUD1-219ENST00000570273 GPNMBQ14956 572 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms