RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 APBB1IPQ7Z5R6 666 aaPredicted RBP18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 HDAC7Q8WUI4 952 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 RPGRIP1Q96KN7 1286 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 FBXL18Q96ME1 805 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 KCNH6Q9H252 994 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 POMKQ9H5K3 350 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 FNIP2Q9P278 1114 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PARP2Q9UGN5 583 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 DPP7Q9UHL4 492 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 VWA8A3KMH1 1905 aa18.82■□□□□ 0.6
MAP1LC3B-208ENST00000570189 K7ERI5 159 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 HIP1RO75146 1068 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 RECQL4O94761 1208 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 CDC25AP30304 524 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ZXDAP98168 799 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 CREMQ03060 361 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 DMP1Q13316 513 aaPredicted RBP18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ATF7IP2Q5U623 682 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 EEF1DP3Q658K8 133 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 FUT10Q6P4F1 479 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 TAS1R1Q7RTX1 841 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 GPR149Q86SP6 731 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 CABP7Q86V35 215 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 SYT2Q8N9I0 419 aaPredicted RBP18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 RUSC1Q9BVN2 902 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PTPRHQ9HD43 1115 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 SNTG2Q9NY99 539 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 RAPGEFL1Q9UHV5 662 aa18.81■□□□□ 0.6
MAP1LC3B-208ENST00000570189 BRD1O95696 1058 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 THP07101 528 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 KLRC2P26717 231 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PLA2G5P39877 138 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 HSP90AA2PQ14568 343 aaPredicted RBP18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 USP41Q3LFD5 358 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 TMEM119Q4V9L6 283 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ATAT1Q5SQI0 421 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 SPIRE2Q8WWL2 714 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PNMA5Q96PV4 448 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 KIFC3Q9BVG8 833 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 GPR62Q9BZJ7 368 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 KLK14Q9P0G3 267 aa18.8■□□□□ 0.6
MAP1LC3B-208ENST00000570189 SF3B1O75533 1304 aaKnown RBP eCLIP18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 VWA3AA6NCI4 1184 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 F8W810 466 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 TMEM189-UBE2V1I3L0A0 370 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 TEX28O15482 410 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PROZP22891 400 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PEX3P56589 373 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PTPN21Q16825 1174 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 XKR4Q5GH76 650 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 RARS2Q5T160 578 aaKnown RBP18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ELMSAN1Q6PJG2 1045 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 TRIM67Q6ZTA4 783 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 TAS1R3Q7RTX0 852 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ZDHHC14Q8IZN3 488 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ACO2Q99798 780 aaKnown RBP18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 APOL5Q9BWW9 433 aa18.79■□□□□ 0.6
MAP1LC3B-208ENST00000570189 KMT2EQ8IZD2 1858 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ABLIM1O14639 778 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 SSBP05455 408 aaKnown RBP eCLIP18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PDCP20941 246 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 SCP2P22307 547 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 GRM5P41594 1212 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 SLC12A3P55017 1021 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 SIGLEC14Q08ET2 396 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ELAVL2Q12926 359 aaKnown RBP18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 TMEM132AQ24JP5 1023 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 ALKAL1Q6UXT8 129 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PLCD3Q8N3E9 789 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 C12orf76Q8N812 135 aaPredicted RBP18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PPP1R10Q96QC0 940 aaKnown RBP18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 MRPL4Q9BYD3 311 aaKnown RBP18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PLEKHA4Q9H4M7 779 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 KMT5AQ9NQR1 393 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 CDH22Q9UJ99 828 aa18.78■□□□□ 0.6
MAP1LC3B-208ENST00000570189 DOCK8Q8NF50 2099 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 CCDC169A6NNP5 214 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 C2CD4DB7Z1M9 353 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 GLUD1P00367 558 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 PLS3P13797 630 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 LILRA6Q6PI73 481 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 HFE2Q6ZVN8 426 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 MFSD14AQ96MC6 490 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 UROC1Q96N76 676 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 POLD4Q9HCU8 107 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 USP20Q9Y2K6 914 aa18.77■□□□□ 0.6
MAP1LC3B-208ENST00000570189 MUC6Q6W4X9 2439 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TMEM221A6NGB7 291 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 M0R296 226 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 C2CD2LO14523 706 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TADA2AO75478 443 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 KIF4AO95239 1232 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 MCF2P10911 925 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 PDXDC1Q6P996 788 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 UBALD2Q8IYN6 164 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 TMEM161BQ8NDZ6 487 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 PIK3R5Q8WYR1 880 aa18.76■□□□□ 0.59
MAP1LC3B-208ENST00000570189 INTS4Q96HW7 963 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms