RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MBTPS2O43462 519 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 EFEMP2O95967 443 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 PROZP22891 400 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 DDIT3P35638 169 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 TXLNAP40222 546 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 SMTNP53814 917 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 NAB2Q15742 525 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 ZNF568Q3ZCX4 644 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 APBB1IPQ7Z5R6 666 aaPredicted RBP14.31□□□□□ -0.12
CNOT1-220ENST00000569916 RNF168Q8IYW5 571 aaPredicted RBP14.31□□□□□ -0.12
CNOT1-220ENST00000569916 CEP120Q8N960 986 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 AUTS2Q8WXX7 1259 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 KCNN1Q92952 543 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 TFIP11Q9UBB9 837 aaKnown RBP14.31□□□□□ -0.12
CNOT1-220ENST00000569916 KCNG1Q9UIX4 513 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 CD207Q9UJ71 328 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 GDAQ9Y2T3 454 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 IRAK3Q9Y616 596 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 TTC28Q96AY4 2481 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 A0A087X0B3 334 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 SPTLC2O15270 562 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 PPP6R2O75170 966 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 FAM13AO94988 1023 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 YEATS4O95619 227 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 BRD1O95696 1058 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 CXCL14O95715 111 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
CNOT1-220ENST00000569916 CA8P35219 290 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 GRM5P41594 1212 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 STRN3Q13033 797 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 COASYQ13057 564 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 SMAD4Q13485 552 aaKnown RBP14.3□□□□□ -0.12
CNOT1-220ENST00000569916 PTPN14Q15678 1187 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 RRAGBQ5VZM2 374 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 MPZL3Q6UWV2 235 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 TMEM184AQ6ZMB5 413 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 HAUS6Q7Z4H7 955 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 FAM178BQ8IXR5 827 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 SMRP1Q8NCR6 262 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 FIZ1Q96SL8 496 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 HERC2P3Q9BVR0 1158 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 PARVGQ9HBI0 331 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 CACNG4Q9UBN1 327 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 STK39Q9UEW8 545 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 MUC3AQ02505 3323 aa14.3□□□□□ -0.12
CNOT1-220ENST00000569916 VWA8A3KMH1 1905 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 H0YCG3 227 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 K7ENM7 598 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 CLASP2O75122 1294 aaKnown RBP14.29□□□□□ -0.12
CNOT1-220ENST00000569916 TBCAO75347 108 aaKnown RBP14.29□□□□□ -0.12
CNOT1-220ENST00000569916 NR1I2O75469 434 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 SOD2P04179 222 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 THP07101 528 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 MCF2P10911 925 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 TUSC3Q13454 348 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 BMS1Q14692 1282 aaKnown RBP14.29□□□□□ -0.12
CNOT1-220ENST00000569916 SMAD2Q15796 467 aaKnown RBP14.29□□□□□ -0.12
CNOT1-220ENST00000569916 FOXD4L6Q3SYB3 417 aaPredicted RBP14.29□□□□□ -0.12
CNOT1-220ENST00000569916 LLGL2Q6P1M3 1020 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 FOXD4L3Q6VB84 417 aaPredicted RBP14.29□□□□□ -0.12
CNOT1-220ENST00000569916 ZPBP2Q6X784 338 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 ZBTB33Q86T24 672 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 MYCT1Q8N699 235 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 ZBTB45Q96K62 511 aaPredicted RBP14.29□□□□□ -0.12
CNOT1-220ENST00000569916 PAAF1Q9BRP4 392 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 FAM50BQ9Y247 325 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 HCFC2Q9Y5Z7 792 aa14.29□□□□□ -0.12
CNOT1-220ENST00000569916 CASTOR2A6NHX0 329 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 MYMKA6NI61 221 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 TRAK2O60296 914 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 LILRB3O75022 631 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 TOM1L1O75674 476 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 STAT6P42226 847 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 OSTNP61366 133 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 NOLC1Q14978 699 aaKnown RBP eCLIP14.28□□□□□ -0.12
CNOT1-220ENST00000569916 GLRA4Q5JXX5 417 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 ANKRD54Q6NXT1 300 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 CCDC73Q6ZRK6 1079 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 TAS1R1Q7RTX1 841 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 RABGGTAQ92696 567 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 PPP1R10Q96QC0 940 aaKnown RBP14.28□□□□□ -0.12
CNOT1-220ENST00000569916 CCDC94Q9BW85 323 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-220ENST00000569916 COLEC11Q9BWP8 271 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 HAPLN2Q9GZV7 340 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 ZHX3Q9H4I2 956 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 CD320Q9NPF0 282 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 ANKFY1Q9P2R3 1169 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 ADAM28Q9UKQ2 775 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 TBX20Q9UMR3 447 aa14.28□□□□□ -0.12
CNOT1-220ENST00000569916 ANK1P16157 1881 aa14.27□□□□□ -0.12
CNOT1-220ENST00000569916 DENND4AQ7Z401 1863 aa14.27□□□□□ -0.12
CNOT1-220ENST00000569916 BDP1A6H8Y1 2624 aa14.27□□□□□ -0.13
CNOT1-220ENST00000569916 MEFVO15553 781 aaPredicted RBP14.27□□□□□ -0.13
CNOT1-220ENST00000569916 CUTAO60888 179 aa14.27□□□□□ -0.13
CNOT1-220ENST00000569916 KIF4AO95239 1232 aa14.27□□□□□ -0.13
CNOT1-220ENST00000569916 PIGRP01833 764 aa14.27□□□□□ -0.13
CNOT1-220ENST00000569916 URODP06132 367 aa14.27□□□□□ -0.13
CNOT1-220ENST00000569916 SRGAP2BP0DMP2 458 aa14.27□□□□□ -0.13
CNOT1-220ENST00000569916 HARSP12081 509 aaKnown RBP14.27□□□□□ -0.13
CNOT1-220ENST00000569916 SCP2P22307 547 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms