RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 TMCO5BA8MYB1 307 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 GOLGA8KD6RF30 607 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 IRF6O14896 467 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 NCK2O43639 380 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 EXTL3O43909 919 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 ZNF862O60290 1169 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 HSF2BPO75031 334 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 HEXIM1O94992 359 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 TFRCP02786 760 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 MYBL1P10243 752 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 CYP2C19P33261 490 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 GCLMP48507 274 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 LIG4P49917 911 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 ALDH5A1P51649 535 aaPredicted RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 EFNA5P52803 228 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 GPC5P78333 572 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 CLDN10P78369 228 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 IRX3P78415 501 aaPredicted RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 PPATQ06203 517 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 PPP3CAQ08209 521 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 PPFIA1Q13136 1202 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 GRM1Q13255 1194 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 MTMR3Q13615 1198 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 VGLL4Q14135 290 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 PLS1Q14651 629 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 PSMD6Q15008 389 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 SURF1Q15526 300 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 ARHGAP44Q17R89 818 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 PLA2G4FQ68DD2 849 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 PHLDB3Q6NSJ2 640 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 SWSAP1Q6NVH7 229 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 TRIM72Q6ZMU5 477 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 MAEAQ7L5Y9 396 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 NT5DC3Q86UY8 548 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 ERO1BQ86YB8 467 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 CCDC60Q8IWA6 550 aaPredicted RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 EFCAB13Q8IY85 973 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 C1orf131Q8NDD1 294 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 DEPTORQ8TB45 409 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 LNX1Q8TBB1 728 aaPredicted RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 EPS8L1Q8TE68 723 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 AFAP1L1Q8TED9 768 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 ZC3H15Q8WU90 426 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 TCP11Q8WWU5 503 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 BICD1Q96G01 975 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 RPS6KC1Q96S38 1066 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 LRRC1Q9BTT6 524 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 NIFKQ9BYG3 293 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 GPR88Q9GZN0 384 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 TMEM117Q9H0C3 514 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 RAB17Q9H0T7 212 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 POLR3FQ9H1D9 316 aaPredicted RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 PORCNQ9H237 461 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 DHX33Q9H6R0 707 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 TMEM134Q9H6X4 195 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 UBE2TQ9NPD8 197 aaPredicted RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 ZNF302Q9NR11 478 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 PDLIM7Q9NR12 457 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 GDF3Q9NR23 364 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 NRBP2Q9NSY0 501 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 RAB20Q9NX57 234 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 GTF3C4Q9UKN8 822 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 HPCAL4Q9UM19 191 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 STXBP5LQ9Y2K9 1186 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 NOC2LQ9Y3T9 749 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 RIPK3Q9Y572 518 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 MAFBQ9Y5Q3 323 aaPredicted RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 SNCAIPQ9Y6H5 919 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 ZC3H4Q9UPT8 1303 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 COL11A1P12107 1806 aaPredicted RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 A0A0G2JLL6 359 aaPredicted RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 SPDYE5A6NIY4 337 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 LRRIQ3A6PVS8 624 aaPredicted RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 FOXN3O00409 490 aaPredicted RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 KRIT1O00522 736 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 CEP104O60308 925 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 BUB1BO60566 1050 aaPredicted RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 LRRN2O75325 713 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 ERLIN2O94905 339 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 STBD1O95210 358 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 ADRB2P07550 413 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 TBXAS1P24557 533 aaPredicted RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 CXCR5P32302 372 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 CDR2Q01850 454 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 PPIL2Q13356 520 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 DHX34Q14147 1143 aaKnown RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 WDR44Q5JSH3 913 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 SPDYCQ5MJ68 293 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 C1orf220Q5T0J3 134 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 GJB7Q6PEY0 223 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 METTL7BQ6UX53 244 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 ZPBP2Q6X784 338 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 LEKR1Q6ZMV7 388 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 SND1Q7KZF4 910 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDH13-213ENST00000569454 FASTKD5Q7L8L6 764 aaKnown RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 PRRT2Q7Z6L0 340 aaPredicted RBP6.16□□□□□ -1.42
CDH13-213ENST00000569454 CBWD2Q8IUF1 395 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 KSR1Q8IVT5 923 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 ANKRD13AQ8IZ07 590 aa6.16□□□□□ -1.42
CDH13-213ENST00000569454 PPM1KQ8N3J5 372 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms