RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 SLC28A3Q9HAS3 691 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 PLEKHA5Q9HAU0 1116 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 RC3H2Q9HBD1 1191 aaKnown RBP9.94□□□□□ -0.82
CHD9-219ENST00000569225 MAPK8IP1Q9UQF2 711 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 RWDD3Q9Y3V2 267 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.94□□□□□ -0.82
CHD9-219ENST00000569225 TMEM265A0A087WTH1 108 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 TISP43B9A030 160 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 INPPL1O15357 1258 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 TGFB1I1O43294 461 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 EXTL3O43909 919 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 CA3P07451 260 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 DNAJB2P25686 324 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 RPL13P26373 211 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 ADSSP30520 456 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 MLH1P40692 756 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 MYBPC2Q14324 1141 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 PAN2Q504Q3 1202 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 SPOUT1Q5T280 376 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 CD302Q8IX05 232 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 C12orf56Q8IXR9 622 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 SMYD4Q8IYR2 804 aaPredicted RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 ADSSL1Q8N142 457 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 DHTKD1Q96HY7 919 aaPredicted RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 CASD1Q96PB1 797 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 FAM193BQ96PV7 902 aaPredicted RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 GAD1Q99259 594 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 CBWD1Q9BRT8 395 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 KCTD10Q9H3F6 313 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 RPF1Q9H9Y2 349 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 AAASQ9NRG9 546 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 RNF19AQ9NV58 838 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 HSPBP1Q9NZL4 362 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 DACH1Q9UI36 760 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 RANBP2P49792 3224 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 TRIOBPQ9H2D6 2365 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 MEIS3P2A8K0S8 358 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 PBX2P40425 430 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 PRCPP42785 496 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 GATMP50440 423 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 PPP2R3AQ06190 1150 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 GRIK3Q13003 919 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 HABP4Q5JVS0 413 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 ISM2Q6H9L7 571 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 GPD1LQ8N335 351 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 CEP120Q8N960 986 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 MLKLQ8NB16 471 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 XXYLT1Q8NBI6 393 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 NOC3LQ8WTT2 800 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 TMEM174Q8WUU8 243 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 SNX27Q96L92 541 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 SAMD11Q96NU1 681 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 FAM213AQ9BRX8 229 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 HAPLN2Q9GZV7 340 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 NKX2-4Q9H2Z4 354 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 SLC38A7Q9NVC3 462 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 CPSF3Q9UKF6 684 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 TRAF3IP3Q9Y228 551 aa9.93□□□□□ -0.82
CHD9-219ENST00000569225 YBX2Q9Y2T7 364 aaKnown RBP9.93□□□□□ -0.82
CHD9-219ENST00000569225 BICDL2A1A5D9 508 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 ZNF233A6NK53 670 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 FAM189A1O60320 539 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 EXOC3O60645 756 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 LETM1O95202 739 aaPredicted RBP9.92□□□□□ -0.82
CHD9-219ENST00000569225 IL18RAPO95256 599 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 POMCP01189 267 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 NR3C1P04150 777 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 MYOGP15173 224 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 LAG3P18627 525 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 ACOT2P49753 483 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 SCNN1GP51170 649 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 CYP2J2P51589 502 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 LRRC63Q05C16 580 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 NFIL3Q16649 462 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 EDRF1Q3B7T1 1238 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 SEZ6Q53EL9 994 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 CAVIN1Q6NZI2 390 aaKnown RBP9.92□□□□□ -0.82
CHD9-219ENST00000569225 SASS6Q6UVJ0 657 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 SLC9A9Q8IVB4 645 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 SAAL1Q96ER3 474 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 ZFP42Q96MM3 310 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 TGS1Q96RS0 853 aaKnown RBP9.92□□□□□ -0.82
CHD9-219ENST00000569225 PCIF1Q9H4Z3 704 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 TBC1D13Q9NVG8 400 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 RBAKQ9NYW8 714 aaPredicted RBP9.92□□□□□ -0.82
CHD9-219ENST00000569225 MRPL42Q9Y6G3 142 aaKnown RBP9.92□□□□□ -0.82
CHD9-219ENST00000569225 COL4A6Q14031 1691 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 MICAL3Q7RTP6 2002 aa9.92□□□□□ -0.82
CHD9-219ENST00000569225 LCHNA4D1U4 455 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 LINC01553A4QN01 128 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 CLIC2O15247 247 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 XPOTO43592 962 aaKnown RBP9.91□□□□□ -0.82
CHD9-219ENST00000569225 THP07101 528 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 CXCL8P10145 99 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 KCNE1P15382 129 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 SURF1Q15526 300 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms