RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 SLC7A14Q8TBB6 771 aa12.66□□□□□ -0.38
CDH3-208ENST00000569036 EVI5LQ96CN4 794 aa12.66□□□□□ -0.38
CDH3-208ENST00000569036 DUSP15Q9H1R2 295 aaPredicted RBP12.66□□□□□ -0.38
CDH3-208ENST00000569036 PIEZO2Q9H5I5 2752 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 CCDC163A0A0D9SF12 145 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 BCLAF3A2AJT9 711 aaKnown RBP12.65□□□□□ -0.38
CDH3-208ENST00000569036 EXTL3O43909 919 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 UAP1L1Q3KQV9 507 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 FAM78AQ5JUQ0 283 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 DGKKQ5KSL6 1271 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 RTP2Q5QGT7 225 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 VITQ6UXI7 678 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 CHCHD4Q8N4Q1 142 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 KRT23Q9C075 422 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 DCTPP1Q9H773 170 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 ZFP14Q9HCL3 533 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 RAXQ9Y2V3 346 aa12.65□□□□□ -0.38
CDH3-208ENST00000569036 A0A087WZ62 844 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 H0Y626 953 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 ARNTLO00327 626 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 TRIM16O95361 564 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 RHOP08100 348 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 PSMC3P17980 439 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 MX1P20591 662 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 SIM1P81133 766 aaPredicted RBP12.64□□□□□ -0.39
CDH3-208ENST00000569036 DRP2Q13474 957 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 CEP55Q53EZ4 464 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 RRP36Q96EU6 259 aaKnown RBP12.64□□□□□ -0.39
CDH3-208ENST00000569036 MSANTD3Q96H12 275 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 UBL7Q96S82 380 aaPredicted RBP12.64□□□□□ -0.39
CDH3-208ENST00000569036 CLSTN3Q9BQT9 956 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 FDXACB1Q9BRP7 624 aaPredicted RBP12.64□□□□□ -0.39
CDH3-208ENST00000569036 SLC32A1Q9H598 525 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 CCDC86Q9H6F5 360 aaKnown RBP12.64□□□□□ -0.39
CDH3-208ENST00000569036 URB1O60287 2271 aaKnown RBP12.64□□□□□ -0.39
CDH3-208ENST00000569036 VWA8A3KMH1 1905 aa12.64□□□□□ -0.39
CDH3-208ENST00000569036 PLXNB3Q9ULL4 1909 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 TK2O00142 265 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 KHNYNO15037 678 aaKnown RBP12.63□□□□□ -0.39
CDH3-208ENST00000569036 DHX15O43143 795 aaKnown RBP12.63□□□□□ -0.39
CDH3-208ENST00000569036 ADAM12O43184 909 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 ZNF862O60290 1169 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 SOX9P48436 509 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 MLLT6P55198 1093 aaPredicted RBP12.63□□□□□ -0.39
CDH3-208ENST00000569036 NBR1Q14596 966 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 ELF2Q15723 593 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 AXDND1Q5T1B0 1012 aaPredicted RBP12.63□□□□□ -0.39
CDH3-208ENST00000569036 TXNDC11Q6PKC3 985 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 CATSPER4Q7RTX7 472 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 ZNF605Q86T29 641 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 CRELD1Q96HD1 420 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 FAM167AQ96KS9 214 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 COLEC11Q9BWP8 271 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 SPZ1Q9BXG8 430 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 CNNM2Q9H8M5 875 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 SENP2Q9HC62 589 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
CDH3-208ENST00000569036 AGPAT5Q9NUQ2 364 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 PTPN13Q12923 2485 aa12.63□□□□□ -0.39
CDH3-208ENST00000569036 NCANO14594 1321 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 ARL5CA6NH57 179 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 SLC38A8A6NNN8 435 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 MEIS1O00470 390 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 ZNF263O14978 683 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 UBXN11Q5T124 520 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 PKN3Q6P5Z2 889 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 C1orf228Q6PIY5 440 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 RAB44Q7Z6P3 723 aaPredicted RBP12.62□□□□□ -0.39
CDH3-208ENST00000569036 MDM1Q8TC05 714 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 DEPDC1BQ8WUY9 529 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 PIK3R5Q8WYR1 880 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 GABBR1Q9UBS5 961 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 SEC63Q9UGP8 760 aaKnown RBP12.62□□□□□ -0.39
CDH3-208ENST00000569036 ADAM28Q9UKQ2 775 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
CDH3-208ENST00000569036 ABCA7Q8IZY2 2146 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 PATE3B3GLJ2 98 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 ARHGAP6O43182 974 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 NR1I2O75469 434 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 RHOBTB1O94844 696 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 OATP04181 439 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 MLH1P40692 756 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 SCNN1GP51170 649 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 CCINQ13939 588 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 PSMD5Q16401 504 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 UVSSAQ2YD98 709 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 PRSS36Q5K4E3 855 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 PIP4P1Q86T03 277 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 TCEAL4Q96EI5 215 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 PGBD1Q96JS3 809 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 GAD1Q99259 594 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 APOL6Q9BWW8 343 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 INO80BQ9C086 356 aaPredicted RBP12.61□□□□□ -0.39
CDH3-208ENST00000569036 CHMP4BQ9H444 224 aaKnown RBP12.61□□□□□ -0.39
CDH3-208ENST00000569036 MIOSQ9NXC5 875 aa12.61□□□□□ -0.39
CDH3-208ENST00000569036 ATG2BQ96BY7 2078 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms