RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 PRIMPOLQ96LW4 560 aa16.67■□□□□ 0.26
COMMD4-223ENST00000568301 NT5C3AQ9H0P0 336 aa16.67■□□□□ 0.26
COMMD4-223ENST00000568301 POLR3FQ9H1D9 316 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-223ENST00000568301 ZDHHC7Q9NXF8 308 aa16.67■□□□□ 0.26
COMMD4-223ENST00000568301 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■□□□ 14.4
COMMD4-223ENST00000568301 ADAM28Q9UKQ2 775 aa16.67■□□□□ 0.26
COMMD4-223ENST00000568301 R4GN57 208 aa16.67■□□□□ 0.26
COMMD4-223ENST00000568301 CLUHO75153 1309 aa16.67■□□□□ 0.26
COMMD4-223ENST00000568301 TGM5O43548 720 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 NPTXRO95502 500 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 LMNAP02545 664 aaKnown RBP16.66■□□□□ 0.26
COMMD4-223ENST00000568301 SPATA31C1P0DKV0 1188 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 TRIM29Q14134 588 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 FAM187BQ17R55 369 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 MCPH1Q8NEM0 835 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 FZD8Q9H461 694 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 TBC1D17Q9HA65 648 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 TUFT1Q9NNX1 390 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 PRMT7Q9NVM4 692 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-223ENST00000568301 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-223ENST00000568301 PARP2Q9UGN5 583 aa16.66■□□□□ 0.26
COMMD4-223ENST00000568301 A0A087WWV3 80 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 LRRIQ4A6NIV6 560 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 WNT7AO00755 349 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 USO1O60763 962 aaKnown RBP16.65■□□□□ 0.26
COMMD4-223ENST00000568301 TADA2AO75478 443 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 DCNP07585 359 aaKnown RBP16.65■□□□□ 0.26
COMMD4-223ENST00000568301 SRFP11831 508 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 RFX1P22670 979 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 SPECC1Q5M775 1068 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 CDCA2Q69YH5 1023 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-223ENST00000568301 CDR2LQ86X02 465 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-223ENST00000568301 CATSPER3Q86XQ3 398 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 ST13P5Q8NFI4 369 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-223ENST00000568301 RMDN1Q96DB5 314 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 B3GALT6Q96L58 329 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 NACC1Q96RE7 527 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 PRKD2Q9BZL6 878 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 SEMA4AQ9H3S1 761 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 PIDD1Q9HB75 910 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 KLK14Q9P0G3 267 aa16.65■□□□□ 0.26
COMMD4-223ENST00000568301 DOCK6Q96HP0 2047 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 POTEMA6NI47 508 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 LARGE1O95461 756 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 LAMP2P13473 410 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 ATP2B1P20020 1258 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 TUSC3Q13454 348 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-223ENST00000568301 ZBTB8OSQ8IWT0 167 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 KIAA2013Q8IYS2 634 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 GPR152Q8TDT2 470 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 POLR3CQ9BUI4 534 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-223ENST00000568301 TMEM60Q9H2L4 133 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 GPRC5CQ9NQ84 441 aa16.64■□□□□ 0.25
COMMD4-223ENST00000568301 SF3B1O75533 1304 aaKnown RBP eCLIP16.64■□□□□ 0.25
COMMD4-223ENST00000568301 N4BP3O15049 544 aa16.63■□□□□ 0.25
COMMD4-223ENST00000568301 JAK2O60674 1132 aa16.63■□□□□ 0.25
COMMD4-223ENST00000568301 ZMYND10O75800 440 aa16.63■□□□□ 0.25
COMMD4-223ENST00000568301 MAEAQ7L5Y9 396 aa16.63■□□□□ 0.25
COMMD4-223ENST00000568301 RABGGTAQ92696 567 aa16.63■□□□□ 0.25
COMMD4-223ENST00000568301 C2orf40Q9H1Z8 148 aa16.63■□□□□ 0.25
COMMD4-223ENST00000568301 DLGAP2Q9P1A6 1054 aa16.63■□□□□ 0.25
COMMD4-223ENST00000568301 SIT1Q9Y3P8 196 aa16.63■□□□□ 0.25
COMMD4-223ENST00000568301 ZFP37Q9Y6Q3 630 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-223ENST00000568301 CACNA1IQ9P0X4 2223 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 OTOGLQ3ZCN5 2332 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 MED19A0JLT2 244 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-223ENST00000568301 ANHXE9PGG2 379 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
COMMD4-223ENST00000568301 MED24O75448 989 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 THP07101 528 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 SP9P0CG40 484 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 RPA1P27694 616 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 MCM7P33993 719 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 NEK4P51957 841 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 ORC2Q13416 577 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-223ENST00000568301 PRPF4BQ13523 1007 aaKnown RBP16.62■□□□□ 0.25
COMMD4-223ENST00000568301 SAFBQ15424 915 aaKnown RBP eCLIP16.62■□□□□ 0.25
COMMD4-223ENST00000568301 MAPK6Q16659 721 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 RTP2Q5QGT7 225 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 PHLDB3Q6NSJ2 640 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 GET4Q7L5D6 327 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-223ENST00000568301 GLYCTKQ8IVS8 523 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 ERMNQ8TAM6 284 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 PAAF1Q9BRP4 392 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 ARHGEF3Q9NR81 526 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 FANCMQ8IYD8 2048 aa16.62■□□□□ 0.25
COMMD4-223ENST00000568301 ACKR2O00590 384 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 PTGESO14684 152 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 HNRNPA1P09651 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
COMMD4-223ENST00000568301 GLULP15104 373 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 RPL17P18621 184 aaKnown RBP16.61■□□□□ 0.25
COMMD4-223ENST00000568301 CYP11B2P19099 503 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 MUTP22033 750 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 ELAVL2Q12926 359 aaKnown RBP16.61■□□□□ 0.25
COMMD4-223ENST00000568301 HTR4Q13639 388 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 FAM171A1Q5VUB5 890 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms